Gene : Lsat_1_v5_gn_1_20300 L. sativa V8
Defline:  (1 of 6) KOG2521 - Uncharacterized conserved protein Genomic Order:  702
Name:  ? Lsat_1_v5_gn_1_20300 Secondary Identifier:  ? PAC:38947333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_20300 0.5kb upstream 0.5kb upstream 7363   true Lsat_1_v8_lg_1: 24553079-24560441 Lactuca sativa
Lsat_1_v5_gn_1_20300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 24553079-24553578 Lactuca sativa
Lsat_1_v5_gn_1_20300 0.5kb downstream 0.5kb downstream 7363   true Lsat_1_v8_lg_1: 24553579-24560941 Lactuca sativa
Lsat_1_v5_gn_1_20300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 24560442-24560941 Lactuca sativa
Lsat_1_v5_gn_1_20300 1.0kb upstream 1.0kb upstream 7863   true Lsat_1_v8_lg_1: 24552579-24560441 Lactuca sativa
Lsat_1_v5_gn_1_20300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 24552579-24553578 Lactuca sativa
Lsat_1_v5_gn_1_20300 1.0kb downstream 1.0kb downstream 7863   true Lsat_1_v8_lg_1: 24553579-24561441 Lactuca sativa
Lsat_1_v5_gn_1_20300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 24560442-24561441 Lactuca sativa
Lsat_1_v5_gn_1_20300 2.0kb upstream 2.0kb upstream 8863   true Lsat_1_v8_lg_1: 24551579-24560441 Lactuca sativa
Lsat_1_v5_gn_1_20300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 24551579-24553578 Lactuca sativa
Lsat_1_v5_gn_1_20300 2.0kb downstream 2.0kb downstream 8863   true Lsat_1_v8_lg_1: 24553579-24562441 Lactuca sativa
Lsat_1_v5_gn_1_20300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 24560442-24562441 Lactuca sativa
Lsat_1_v5_gn_1_20300 5.0kb upstream 5.0kb upstream 11863   true Lsat_1_v8_lg_1: 24548579-24560441 Lactuca sativa
Lsat_1_v5_gn_1_20300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 24548579-24553578 Lactuca sativa
Lsat_1_v5_gn_1_20300 5.0kb downstream 5.0kb downstream 11863   true Lsat_1_v8_lg_1: 24553579-24565441 Lactuca sativa
Lsat_1_v5_gn_1_20300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 24560442-24565441 Lactuca sativa
Lsat_1_v5_gn_1_20300 10.0kb upstream 10.0kb upstream 16863   true Lsat_1_v8_lg_1: 24543579-24560441 Lactuca sativa
Lsat_1_v5_gn_1_20300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 24543579-24553578 Lactuca sativa
Lsat_1_v5_gn_1_20300 10.0kb downstream 10.0kb downstream 16863   true Lsat_1_v8_lg_1: 24553579-24570441 Lactuca sativa
Lsat_1_v5_gn_1_20300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 24560442-24570441 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475216 5263 Asterids View MSA
123747680 5271 Pentapetalae View MSA
122786180 5272 Eudicot View MSA
122043502 5273 Angiosperm View MSA
121347212 5274 Embryophyte View MSA
123380510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain