Gene : Lsat_1_v5_gn_1_20440 L. sativa V8
Defline:  (1 of 5) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A Genomic Order:  680
Name:  ? Lsat_1_v5_gn_1_20440 Secondary Identifier:  ? PAC:38947310
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_20440 0.5kb upstream 0.5kb upstream 3935   true Lsat_1_v8_lg_1: 23904800-23908734 Lactuca sativa
Lsat_1_v5_gn_1_20440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 23908235-23908734 Lactuca sativa
Lsat_1_v5_gn_1_20440 0.5kb downstream 0.5kb downstream 3935   true Lsat_1_v8_lg_1: 23904300-23908234 Lactuca sativa
Lsat_1_v5_gn_1_20440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 23904300-23904799 Lactuca sativa
Lsat_1_v5_gn_1_20440 1.0kb upstream 1.0kb upstream 4435   true Lsat_1_v8_lg_1: 23904800-23909234 Lactuca sativa
Lsat_1_v5_gn_1_20440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 23908235-23909234 Lactuca sativa
Lsat_1_v5_gn_1_20440 1.0kb downstream 1.0kb downstream 4435   true Lsat_1_v8_lg_1: 23903800-23908234 Lactuca sativa
Lsat_1_v5_gn_1_20440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 23903800-23904799 Lactuca sativa
Lsat_1_v5_gn_1_20440 2.0kb upstream 2.0kb upstream 5435   true Lsat_1_v8_lg_1: 23904800-23910234 Lactuca sativa
Lsat_1_v5_gn_1_20440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 23908235-23910234 Lactuca sativa
Lsat_1_v5_gn_1_20440 2.0kb downstream 2.0kb downstream 5435   true Lsat_1_v8_lg_1: 23902800-23908234 Lactuca sativa
Lsat_1_v5_gn_1_20440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 23902800-23904799 Lactuca sativa
Lsat_1_v5_gn_1_20440 5.0kb upstream 5.0kb upstream 8435   true Lsat_1_v8_lg_1: 23904800-23913234 Lactuca sativa
Lsat_1_v5_gn_1_20440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 23908235-23913234 Lactuca sativa
Lsat_1_v5_gn_1_20440 5.0kb downstream 5.0kb downstream 8435   true Lsat_1_v8_lg_1: 23899800-23908234 Lactuca sativa
Lsat_1_v5_gn_1_20440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 23899800-23904799 Lactuca sativa
Lsat_1_v5_gn_1_20440 10.0kb upstream 10.0kb upstream 13435   true Lsat_1_v8_lg_1: 23904800-23918234 Lactuca sativa
Lsat_1_v5_gn_1_20440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 23908235-23918234 Lactuca sativa
Lsat_1_v5_gn_1_20440 10.0kb downstream 10.0kb downstream 13435   true Lsat_1_v8_lg_1: 23894800-23908234 Lactuca sativa
Lsat_1_v5_gn_1_20440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 23894800-23904799 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470881 5263 Asterids View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain