Gene : Lsat_1_v5_gn_1_22400 L. sativa V8
Defline:  (1 of 4) 3.4.22.67 - Zingipain / Zingibain Genomic Order:  748
Name:  ? Lsat_1_v5_gn_1_22400 Secondary Identifier:  ? PAC:38944501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_22400 0.5kb upstream 0.5kb upstream 3669   true Lsat_1_v8_lg_1: 26640476-26644144 Lactuca sativa
Lsat_1_v5_gn_1_22400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 26640476-26640975 Lactuca sativa
Lsat_1_v5_gn_1_22400 0.5kb downstream 0.5kb downstream 3669   true Lsat_1_v8_lg_1: 26640976-26644644 Lactuca sativa
Lsat_1_v5_gn_1_22400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 26644145-26644644 Lactuca sativa
Lsat_1_v5_gn_1_22400 1.0kb upstream 1.0kb upstream 4169   true Lsat_1_v8_lg_1: 26639976-26644144 Lactuca sativa
Lsat_1_v5_gn_1_22400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 26639976-26640975 Lactuca sativa
Lsat_1_v5_gn_1_22400 1.0kb downstream 1.0kb downstream 4169   true Lsat_1_v8_lg_1: 26640976-26645144 Lactuca sativa
Lsat_1_v5_gn_1_22400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 26644145-26645144 Lactuca sativa
Lsat_1_v5_gn_1_22400 2.0kb upstream 2.0kb upstream 5169   true Lsat_1_v8_lg_1: 26638976-26644144 Lactuca sativa
Lsat_1_v5_gn_1_22400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 26638976-26640975 Lactuca sativa
Lsat_1_v5_gn_1_22400 2.0kb downstream 2.0kb downstream 5169   true Lsat_1_v8_lg_1: 26640976-26646144 Lactuca sativa
Lsat_1_v5_gn_1_22400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 26644145-26646144 Lactuca sativa
Lsat_1_v5_gn_1_22400 5.0kb upstream 5.0kb upstream 8169   true Lsat_1_v8_lg_1: 26635976-26644144 Lactuca sativa
Lsat_1_v5_gn_1_22400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 26635976-26640975 Lactuca sativa
Lsat_1_v5_gn_1_22400 5.0kb downstream 5.0kb downstream 8169   true Lsat_1_v8_lg_1: 26640976-26649144 Lactuca sativa
Lsat_1_v5_gn_1_22400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 26644145-26649144 Lactuca sativa
Lsat_1_v5_gn_1_22400 10.0kb upstream 10.0kb upstream 13169   true Lsat_1_v8_lg_1: 26630976-26644144 Lactuca sativa
Lsat_1_v5_gn_1_22400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 26630976-26640975 Lactuca sativa
Lsat_1_v5_gn_1_22400 10.0kb downstream 10.0kb downstream 13169   true Lsat_1_v8_lg_1: 26640976-26654144 Lactuca sativa
Lsat_1_v5_gn_1_22400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 26644145-26654144 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
121440965 5263 Asterids Singleton cluster - no MSA
123753893 5271 Pentapetalae View MSA
122775321 5272 Eudicot View MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain