Gene : Lsat_1_v5_gn_1_2401 L. sativa V8
Defline:  (1 of 1) 1.4.3.5//5.1.99.6 - Pyridoxal 5'-phosphate synthase / Pyridoxine (pyridoxamine)phosphate oxidase // NAD(P)H-hydrate epimerase / NAD(P)HX epimerase Genomic Order:  67
Name:  ? Lsat_1_v5_gn_1_2401 Secondary Identifier:  ? PAC:38946773
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PLPSAL-PWY Lactuca sativa pathologic  
Lsativa PWY-6938 Lactuca sativa pathologic  
Lsativa PWY-7204 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_2401 0.5kb upstream 0.5kb upstream 13007   true Lsat_1_v8_lg_1: 3045070-3058076 Lactuca sativa
Lsat_1_v5_gn_1_2401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 3057577-3058076 Lactuca sativa
Lsat_1_v5_gn_1_2401 0.5kb downstream 0.5kb downstream 13007   true Lsat_1_v8_lg_1: 3044570-3057576 Lactuca sativa
Lsat_1_v5_gn_1_2401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 3044570-3045069 Lactuca sativa
Lsat_1_v5_gn_1_2401 1.0kb upstream 1.0kb upstream 13507   true Lsat_1_v8_lg_1: 3045070-3058576 Lactuca sativa
Lsat_1_v5_gn_1_2401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 3057577-3058576 Lactuca sativa
Lsat_1_v5_gn_1_2401 1.0kb downstream 1.0kb downstream 13507   true Lsat_1_v8_lg_1: 3044070-3057576 Lactuca sativa
Lsat_1_v5_gn_1_2401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 3044070-3045069 Lactuca sativa
Lsat_1_v5_gn_1_2401 2.0kb upstream 2.0kb upstream 14507   true Lsat_1_v8_lg_1: 3045070-3059576 Lactuca sativa
Lsat_1_v5_gn_1_2401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 3057577-3059576 Lactuca sativa
Lsat_1_v5_gn_1_2401 2.0kb downstream 2.0kb downstream 14507   true Lsat_1_v8_lg_1: 3043070-3057576 Lactuca sativa
Lsat_1_v5_gn_1_2401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 3043070-3045069 Lactuca sativa
Lsat_1_v5_gn_1_2401 5.0kb upstream 5.0kb upstream 17507   true Lsat_1_v8_lg_1: 3045070-3062576 Lactuca sativa
Lsat_1_v5_gn_1_2401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 3057577-3062576 Lactuca sativa
Lsat_1_v5_gn_1_2401 5.0kb downstream 5.0kb downstream 17507   true Lsat_1_v8_lg_1: 3040070-3057576 Lactuca sativa
Lsat_1_v5_gn_1_2401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 3040070-3045069 Lactuca sativa
Lsat_1_v5_gn_1_2401 10.0kb upstream 10.0kb upstream 22507   true Lsat_1_v8_lg_1: 3045070-3067576 Lactuca sativa
Lsat_1_v5_gn_1_2401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 3057577-3067576 Lactuca sativa
Lsat_1_v5_gn_1_2401 10.0kb downstream 10.0kb downstream 22507   true Lsat_1_v8_lg_1: 3035070-3057576 Lactuca sativa
Lsat_1_v5_gn_1_2401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 3035070-3045069 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466675 5263 Asterids View MSA
123736621 5271 Pentapetalae View MSA
122791647 5272 Eudicot View MSA
122043003 5273 Angiosperm View MSA
121346013 5274 Embryophyte View MSA
123424546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain