Gene : Lsat_1_v5_gn_1_24560 L. sativa V8
Defline:  (1 of 2) PF09835 - Uncharacterized protein conserved in bacteria (DUF2062) (DUF2062) Genomic Order:  820
Name:  ? Lsat_1_v5_gn_1_24560 Secondary Identifier:  ? PAC:38946656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_24560 0.5kb upstream 0.5kb upstream 2668   true Lsat_1_v8_lg_1: 28996494-28999161 Lactuca sativa
Lsat_1_v5_gn_1_24560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 28996494-28996993 Lactuca sativa
Lsat_1_v5_gn_1_24560 0.5kb downstream 0.5kb downstream 2668   true Lsat_1_v8_lg_1: 28996994-28999661 Lactuca sativa
Lsat_1_v5_gn_1_24560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 28999162-28999661 Lactuca sativa
Lsat_1_v5_gn_1_24560 1.0kb upstream 1.0kb upstream 3168   true Lsat_1_v8_lg_1: 28995994-28999161 Lactuca sativa
Lsat_1_v5_gn_1_24560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 28995994-28996993 Lactuca sativa
Lsat_1_v5_gn_1_24560 1.0kb downstream 1.0kb downstream 3168   true Lsat_1_v8_lg_1: 28996994-29000161 Lactuca sativa
Lsat_1_v5_gn_1_24560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 28999162-29000161 Lactuca sativa
Lsat_1_v5_gn_1_24560 2.0kb upstream 2.0kb upstream 4168   true Lsat_1_v8_lg_1: 28994994-28999161 Lactuca sativa
Lsat_1_v5_gn_1_24560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 28994994-28996993 Lactuca sativa
Lsat_1_v5_gn_1_24560 2.0kb downstream 2.0kb downstream 4168   true Lsat_1_v8_lg_1: 28996994-29001161 Lactuca sativa
Lsat_1_v5_gn_1_24560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 28999162-29001161 Lactuca sativa
Lsat_1_v5_gn_1_24560 5.0kb upstream 5.0kb upstream 7168   true Lsat_1_v8_lg_1: 28991994-28999161 Lactuca sativa
Lsat_1_v5_gn_1_24560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 28991994-28996993 Lactuca sativa
Lsat_1_v5_gn_1_24560 5.0kb downstream 5.0kb downstream 7168   true Lsat_1_v8_lg_1: 28996994-29004161 Lactuca sativa
Lsat_1_v5_gn_1_24560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 28999162-29004161 Lactuca sativa
Lsat_1_v5_gn_1_24560 10.0kb upstream 10.0kb upstream 12168   true Lsat_1_v8_lg_1: 28986994-28999161 Lactuca sativa
Lsat_1_v5_gn_1_24560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 28986994-28996993 Lactuca sativa
Lsat_1_v5_gn_1_24560 10.0kb downstream 10.0kb downstream 12168   true Lsat_1_v8_lg_1: 28996994-29009161 Lactuca sativa
Lsat_1_v5_gn_1_24560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 28999162-29009161 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481577 5263 Asterids View MSA
123747275 5271 Pentapetalae View MSA
122793637 5272 Eudicot View MSA
122044467 5273 Angiosperm View MSA
121347646 5274 Embryophyte View MSA
123380588 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain