Gene : Lsat_1_v5_gn_1_25461 L. sativa V8
Defline:  (1 of 1) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Genomic Order:  854
Name:  ? Lsat_1_v5_gn_1_25461 Secondary Identifier:  ? PAC:38947495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_25461 0.5kb upstream 0.5kb upstream 4193   true Lsat_1_v8_lg_1: 29821445-29825637 Lactuca sativa
Lsat_1_v5_gn_1_25461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 29825138-29825637 Lactuca sativa
Lsat_1_v5_gn_1_25461 0.5kb downstream 0.5kb downstream 4193   true Lsat_1_v8_lg_1: 29820945-29825137 Lactuca sativa
Lsat_1_v5_gn_1_25461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 29820945-29821444 Lactuca sativa
Lsat_1_v5_gn_1_25461 1.0kb upstream 1.0kb upstream 4693   true Lsat_1_v8_lg_1: 29821445-29826137 Lactuca sativa
Lsat_1_v5_gn_1_25461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 29825138-29826137 Lactuca sativa
Lsat_1_v5_gn_1_25461 1.0kb downstream 1.0kb downstream 4693   true Lsat_1_v8_lg_1: 29820445-29825137 Lactuca sativa
Lsat_1_v5_gn_1_25461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 29820445-29821444 Lactuca sativa
Lsat_1_v5_gn_1_25461 2.0kb upstream 2.0kb upstream 5693   true Lsat_1_v8_lg_1: 29821445-29827137 Lactuca sativa
Lsat_1_v5_gn_1_25461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 29825138-29827137 Lactuca sativa
Lsat_1_v5_gn_1_25461 2.0kb downstream 2.0kb downstream 5693   true Lsat_1_v8_lg_1: 29819445-29825137 Lactuca sativa
Lsat_1_v5_gn_1_25461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 29819445-29821444 Lactuca sativa
Lsat_1_v5_gn_1_25461 5.0kb upstream 5.0kb upstream 8693   true Lsat_1_v8_lg_1: 29821445-29830137 Lactuca sativa
Lsat_1_v5_gn_1_25461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 29825138-29830137 Lactuca sativa
Lsat_1_v5_gn_1_25461 5.0kb downstream 5.0kb downstream 8693   true Lsat_1_v8_lg_1: 29816445-29825137 Lactuca sativa
Lsat_1_v5_gn_1_25461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 29816445-29821444 Lactuca sativa
Lsat_1_v5_gn_1_25461 10.0kb upstream 10.0kb upstream 13693   true Lsat_1_v8_lg_1: 29821445-29835137 Lactuca sativa
Lsat_1_v5_gn_1_25461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 29825138-29835137 Lactuca sativa
Lsat_1_v5_gn_1_25461 10.0kb downstream 10.0kb downstream 13693   true Lsat_1_v8_lg_1: 29811445-29825137 Lactuca sativa
Lsat_1_v5_gn_1_25461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 29811445-29821444 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476382 5263 Asterids View MSA
123738700 5271 Pentapetalae View MSA
122785851 5272 Eudicot View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain