Gene : Lsat_1_v5_gn_1_25281 L. sativa V8
Defline:  (1 of 1) K15407 - queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29] (QTRTD1) Genomic Order:  846
Name:  ? Lsat_1_v5_gn_1_25281 Secondary Identifier:  ? PAC:38945385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_25281 0.5kb upstream 0.5kb upstream 3205   true Lsat_1_v8_lg_1: 29676210-29679414 Lactuca sativa
Lsat_1_v5_gn_1_25281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 29678915-29679414 Lactuca sativa
Lsat_1_v5_gn_1_25281 0.5kb downstream 0.5kb downstream 3205   true Lsat_1_v8_lg_1: 29675710-29678914 Lactuca sativa
Lsat_1_v5_gn_1_25281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 29675710-29676209 Lactuca sativa
Lsat_1_v5_gn_1_25281 1.0kb upstream 1.0kb upstream 3705   true Lsat_1_v8_lg_1: 29676210-29679914 Lactuca sativa
Lsat_1_v5_gn_1_25281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 29678915-29679914 Lactuca sativa
Lsat_1_v5_gn_1_25281 1.0kb downstream 1.0kb downstream 3705   true Lsat_1_v8_lg_1: 29675210-29678914 Lactuca sativa
Lsat_1_v5_gn_1_25281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 29675210-29676209 Lactuca sativa
Lsat_1_v5_gn_1_25281 2.0kb upstream 2.0kb upstream 4705   true Lsat_1_v8_lg_1: 29676210-29680914 Lactuca sativa
Lsat_1_v5_gn_1_25281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 29678915-29680914 Lactuca sativa
Lsat_1_v5_gn_1_25281 2.0kb downstream 2.0kb downstream 4705   true Lsat_1_v8_lg_1: 29674210-29678914 Lactuca sativa
Lsat_1_v5_gn_1_25281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 29674210-29676209 Lactuca sativa
Lsat_1_v5_gn_1_25281 5.0kb upstream 5.0kb upstream 7705   true Lsat_1_v8_lg_1: 29676210-29683914 Lactuca sativa
Lsat_1_v5_gn_1_25281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 29678915-29683914 Lactuca sativa
Lsat_1_v5_gn_1_25281 5.0kb downstream 5.0kb downstream 7705   true Lsat_1_v8_lg_1: 29671210-29678914 Lactuca sativa
Lsat_1_v5_gn_1_25281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 29671210-29676209 Lactuca sativa
Lsat_1_v5_gn_1_25281 10.0kb upstream 10.0kb upstream 12705   true Lsat_1_v8_lg_1: 29676210-29688914 Lactuca sativa
Lsat_1_v5_gn_1_25281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 29678915-29688914 Lactuca sativa
Lsat_1_v5_gn_1_25281 10.0kb downstream 10.0kb downstream 12705   true Lsat_1_v8_lg_1: 29666210-29678914 Lactuca sativa
Lsat_1_v5_gn_1_25281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 29666210-29676209 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469093 5263 Asterids View MSA
123742380 5271 Pentapetalae View MSA
122795128 5272 Eudicot View MSA
122048440 5273 Angiosperm View MSA
121348371 5274 Embryophyte View MSA
123426152 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain