Gene : Lsat_1_v5_gn_1_129320 L. sativa V8
Defline:  (1 of 1) PTHR19919//PTHR19919:SF2 - WD REPEAT CONTAINING PROTEIN // PROTEIN TRANSPARENT TESTA GLABRA 1 Genomic Order:  3905
Name:  ? Lsat_1_v5_gn_1_129320 Secondary Identifier:  ? PAC:38947203
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_129320 0.5kb upstream 0.5kb upstream 1827   true Lsat_1_v8_lg_1: 212331570-212333396 Lactuca sativa
Lsat_1_v5_gn_1_129320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 212331570-212332069 Lactuca sativa
Lsat_1_v5_gn_1_129320 0.5kb downstream 0.5kb downstream 1827   true Lsat_1_v8_lg_1: 212332070-212333896 Lactuca sativa
Lsat_1_v5_gn_1_129320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 212333397-212333896 Lactuca sativa
Lsat_1_v5_gn_1_129320 1.0kb upstream 1.0kb upstream 2327   true Lsat_1_v8_lg_1: 212331070-212333396 Lactuca sativa
Lsat_1_v5_gn_1_129320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 212331070-212332069 Lactuca sativa
Lsat_1_v5_gn_1_129320 1.0kb downstream 1.0kb downstream 2327   true Lsat_1_v8_lg_1: 212332070-212334396 Lactuca sativa
Lsat_1_v5_gn_1_129320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 212333397-212334396 Lactuca sativa
Lsat_1_v5_gn_1_129320 2.0kb upstream 2.0kb upstream 3327   true Lsat_1_v8_lg_1: 212330070-212333396 Lactuca sativa
Lsat_1_v5_gn_1_129320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 212330070-212332069 Lactuca sativa
Lsat_1_v5_gn_1_129320 2.0kb downstream 2.0kb downstream 3327   true Lsat_1_v8_lg_1: 212332070-212335396 Lactuca sativa
Lsat_1_v5_gn_1_129320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 212333397-212335396 Lactuca sativa
Lsat_1_v5_gn_1_129320 5.0kb upstream 5.0kb upstream 6327   true Lsat_1_v8_lg_1: 212327070-212333396 Lactuca sativa
Lsat_1_v5_gn_1_129320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 212327070-212332069 Lactuca sativa
Lsat_1_v5_gn_1_129320 5.0kb downstream 5.0kb downstream 6327   true Lsat_1_v8_lg_1: 212332070-212338396 Lactuca sativa
Lsat_1_v5_gn_1_129320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 212333397-212338396 Lactuca sativa
Lsat_1_v5_gn_1_129320 10.0kb upstream 10.0kb upstream 11327   true Lsat_1_v8_lg_1: 212322070-212333396 Lactuca sativa
Lsat_1_v5_gn_1_129320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 212322070-212332069 Lactuca sativa
Lsat_1_v5_gn_1_129320 10.0kb downstream 10.0kb downstream 11327   true Lsat_1_v8_lg_1: 212332070-212343396 Lactuca sativa
Lsat_1_v5_gn_1_129320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 212333397-212343396 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473774 5263 Asterids View MSA
123745660 5271 Pentapetalae View MSA
122791660 5272 Eudicot View MSA
122050418 5273 Angiosperm View MSA
121348109 5274 Embryophyte View MSA
123423806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain