Gene : Lsat_1_v5_gn_1_129780 L. sativa V8
Defline:  (1 of 1) PTHR11266:SF15 - PEROXISOMAL MEMBRANE PROTEIN PMP22 Genomic Order:  3890
Name:  ? Lsat_1_v5_gn_1_129780 Secondary Identifier:  ? PAC:38945309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_129780 0.5kb upstream 0.5kb upstream 3541   true Lsat_1_v8_lg_1: 211042086-211045626 Lactuca sativa
Lsat_1_v5_gn_1_129780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 211042086-211042585 Lactuca sativa
Lsat_1_v5_gn_1_129780 0.5kb downstream 0.5kb downstream 3541   true Lsat_1_v8_lg_1: 211042586-211046126 Lactuca sativa
Lsat_1_v5_gn_1_129780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 211045627-211046126 Lactuca sativa
Lsat_1_v5_gn_1_129780 1.0kb upstream 1.0kb upstream 4041   true Lsat_1_v8_lg_1: 211041586-211045626 Lactuca sativa
Lsat_1_v5_gn_1_129780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 211041586-211042585 Lactuca sativa
Lsat_1_v5_gn_1_129780 1.0kb downstream 1.0kb downstream 4041   true Lsat_1_v8_lg_1: 211042586-211046626 Lactuca sativa
Lsat_1_v5_gn_1_129780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 211045627-211046626 Lactuca sativa
Lsat_1_v5_gn_1_129780 2.0kb upstream 2.0kb upstream 5041   true Lsat_1_v8_lg_1: 211040586-211045626 Lactuca sativa
Lsat_1_v5_gn_1_129780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 211040586-211042585 Lactuca sativa
Lsat_1_v5_gn_1_129780 2.0kb downstream 2.0kb downstream 5041   true Lsat_1_v8_lg_1: 211042586-211047626 Lactuca sativa
Lsat_1_v5_gn_1_129780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 211045627-211047626 Lactuca sativa
Lsat_1_v5_gn_1_129780 5.0kb upstream 5.0kb upstream 8041   true Lsat_1_v8_lg_1: 211037586-211045626 Lactuca sativa
Lsat_1_v5_gn_1_129780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 211037586-211042585 Lactuca sativa
Lsat_1_v5_gn_1_129780 5.0kb downstream 5.0kb downstream 8041   true Lsat_1_v8_lg_1: 211042586-211050626 Lactuca sativa
Lsat_1_v5_gn_1_129780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 211045627-211050626 Lactuca sativa
Lsat_1_v5_gn_1_129780 10.0kb upstream 10.0kb upstream 13041   true Lsat_1_v8_lg_1: 211032586-211045626 Lactuca sativa
Lsat_1_v5_gn_1_129780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 211032586-211042585 Lactuca sativa
Lsat_1_v5_gn_1_129780 10.0kb downstream 10.0kb downstream 13041   true Lsat_1_v8_lg_1: 211042586-211055626 Lactuca sativa
Lsat_1_v5_gn_1_129780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 211045627-211055626 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479972 5263 Asterids View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain