Gene : Lsat_1_v5_gn_1_15100 L. sativa V8
Defline:  (1 of 7) PTHR31992//PTHR31992:SF8 - FAMILY NOT NAMED // DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  504
Name:  ? Lsat_1_v5_gn_1_15100 Secondary Identifier:  ? PAC:38946915
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_15100 0.5kb upstream 0.5kb upstream 1620   true Lsat_1_v8_lg_1: 17181386-17183005 Lactuca sativa
Lsat_1_v5_gn_1_15100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 17182506-17183005 Lactuca sativa
Lsat_1_v5_gn_1_15100 0.5kb downstream 0.5kb downstream 1620   true Lsat_1_v8_lg_1: 17180886-17182505 Lactuca sativa
Lsat_1_v5_gn_1_15100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 17180886-17181385 Lactuca sativa
Lsat_1_v5_gn_1_15100 1.0kb upstream 1.0kb upstream 2120   true Lsat_1_v8_lg_1: 17181386-17183505 Lactuca sativa
Lsat_1_v5_gn_1_15100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 17182506-17183505 Lactuca sativa
Lsat_1_v5_gn_1_15100 1.0kb downstream 1.0kb downstream 2120   true Lsat_1_v8_lg_1: 17180386-17182505 Lactuca sativa
Lsat_1_v5_gn_1_15100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 17180386-17181385 Lactuca sativa
Lsat_1_v5_gn_1_15100 2.0kb upstream 2.0kb upstream 3120   true Lsat_1_v8_lg_1: 17181386-17184505 Lactuca sativa
Lsat_1_v5_gn_1_15100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 17182506-17184505 Lactuca sativa
Lsat_1_v5_gn_1_15100 2.0kb downstream 2.0kb downstream 3120   true Lsat_1_v8_lg_1: 17179386-17182505 Lactuca sativa
Lsat_1_v5_gn_1_15100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 17179386-17181385 Lactuca sativa
Lsat_1_v5_gn_1_15100 5.0kb upstream 5.0kb upstream 6120   true Lsat_1_v8_lg_1: 17181386-17187505 Lactuca sativa
Lsat_1_v5_gn_1_15100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 17182506-17187505 Lactuca sativa
Lsat_1_v5_gn_1_15100 5.0kb downstream 5.0kb downstream 6120   true Lsat_1_v8_lg_1: 17176386-17182505 Lactuca sativa
Lsat_1_v5_gn_1_15100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 17176386-17181385 Lactuca sativa
Lsat_1_v5_gn_1_15100 10.0kb upstream 10.0kb upstream 11120   true Lsat_1_v8_lg_1: 17181386-17192505 Lactuca sativa
Lsat_1_v5_gn_1_15100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 17182506-17192505 Lactuca sativa
Lsat_1_v5_gn_1_15100 10.0kb downstream 10.0kb downstream 11120   true Lsat_1_v8_lg_1: 17171386-17182505 Lactuca sativa
Lsat_1_v5_gn_1_15100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 17171386-17181385 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471747 5263 Asterids View MSA
123739205 5271 Pentapetalae View MSA
122790965 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain