Gene : Lsat_1_v5_gn_1_15581 L. sativa V8
Defline:  (1 of 2) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  521
Name:  ? Lsat_1_v5_gn_1_15581 Secondary Identifier:  ? PAC:38948768
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_15581 0.5kb upstream 0.5kb upstream 1578   true Lsat_1_v8_lg_1: 17941112-17942689 Lactuca sativa
Lsat_1_v5_gn_1_15581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 17942190-17942689 Lactuca sativa
Lsat_1_v5_gn_1_15581 0.5kb downstream 0.5kb downstream 1578   true Lsat_1_v8_lg_1: 17940612-17942189 Lactuca sativa
Lsat_1_v5_gn_1_15581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 17940612-17941111 Lactuca sativa
Lsat_1_v5_gn_1_15581 1.0kb upstream 1.0kb upstream 2078   true Lsat_1_v8_lg_1: 17941112-17943189 Lactuca sativa
Lsat_1_v5_gn_1_15581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 17942190-17943189 Lactuca sativa
Lsat_1_v5_gn_1_15581 1.0kb downstream 1.0kb downstream 2078   true Lsat_1_v8_lg_1: 17940112-17942189 Lactuca sativa
Lsat_1_v5_gn_1_15581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 17940112-17941111 Lactuca sativa
Lsat_1_v5_gn_1_15581 2.0kb upstream 2.0kb upstream 3078   true Lsat_1_v8_lg_1: 17941112-17944189 Lactuca sativa
Lsat_1_v5_gn_1_15581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 17942190-17944189 Lactuca sativa
Lsat_1_v5_gn_1_15581 2.0kb downstream 2.0kb downstream 3078   true Lsat_1_v8_lg_1: 17939112-17942189 Lactuca sativa
Lsat_1_v5_gn_1_15581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 17939112-17941111 Lactuca sativa
Lsat_1_v5_gn_1_15581 5.0kb upstream 5.0kb upstream 6078   true Lsat_1_v8_lg_1: 17941112-17947189 Lactuca sativa
Lsat_1_v5_gn_1_15581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 17942190-17947189 Lactuca sativa
Lsat_1_v5_gn_1_15581 5.0kb downstream 5.0kb downstream 6078   true Lsat_1_v8_lg_1: 17936112-17942189 Lactuca sativa
Lsat_1_v5_gn_1_15581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 17936112-17941111 Lactuca sativa
Lsat_1_v5_gn_1_15581 10.0kb upstream 10.0kb upstream 11078   true Lsat_1_v8_lg_1: 17941112-17952189 Lactuca sativa
Lsat_1_v5_gn_1_15581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 17942190-17952189 Lactuca sativa
Lsat_1_v5_gn_1_15581 10.0kb downstream 10.0kb downstream 11078   true Lsat_1_v8_lg_1: 17931112-17942189 Lactuca sativa
Lsat_1_v5_gn_1_15581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 17931112-17941111 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
121479606 5263 Asterids View MSA
123737256 5271 Pentapetalae View MSA
122793138 5272 Eudicot View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain