Gene : Lsat_1_v5_gn_1_1740 L. sativa V8
Defline:  (1 of 1) KOG1865//KOG1873 - Ubiquitin carboxyl-terminal hydrolase // Ubiquitin-specific protease Genomic Order:  49
Name:  ? Lsat_1_v5_gn_1_1740 Secondary Identifier:  ? PAC:38943942
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_1740 0.5kb upstream 0.5kb upstream 7830   true Lsat_1_v8_lg_1: 2221653-2229482 Lactuca sativa
Lsat_1_v5_gn_1_1740 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 2228983-2229482 Lactuca sativa
Lsat_1_v5_gn_1_1740 0.5kb downstream 0.5kb downstream 7830   true Lsat_1_v8_lg_1: 2221153-2228982 Lactuca sativa
Lsat_1_v5_gn_1_1740 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 2221153-2221652 Lactuca sativa
Lsat_1_v5_gn_1_1740 1.0kb upstream 1.0kb upstream 8330   true Lsat_1_v8_lg_1: 2221653-2229982 Lactuca sativa
Lsat_1_v5_gn_1_1740 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 2228983-2229982 Lactuca sativa
Lsat_1_v5_gn_1_1740 1.0kb downstream 1.0kb downstream 8330   true Lsat_1_v8_lg_1: 2220653-2228982 Lactuca sativa
Lsat_1_v5_gn_1_1740 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 2220653-2221652 Lactuca sativa
Lsat_1_v5_gn_1_1740 2.0kb upstream 2.0kb upstream 9330   true Lsat_1_v8_lg_1: 2221653-2230982 Lactuca sativa
Lsat_1_v5_gn_1_1740 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 2228983-2230982 Lactuca sativa
Lsat_1_v5_gn_1_1740 2.0kb downstream 2.0kb downstream 9330   true Lsat_1_v8_lg_1: 2219653-2228982 Lactuca sativa
Lsat_1_v5_gn_1_1740 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 2219653-2221652 Lactuca sativa
Lsat_1_v5_gn_1_1740 5.0kb upstream 5.0kb upstream 12330   true Lsat_1_v8_lg_1: 2221653-2233982 Lactuca sativa
Lsat_1_v5_gn_1_1740 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 2228983-2233982 Lactuca sativa
Lsat_1_v5_gn_1_1740 5.0kb downstream 5.0kb downstream 12330   true Lsat_1_v8_lg_1: 2216653-2228982 Lactuca sativa
Lsat_1_v5_gn_1_1740 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 2216653-2221652 Lactuca sativa
Lsat_1_v5_gn_1_1740 10.0kb upstream 10.0kb upstream 17330   true Lsat_1_v8_lg_1: 2221653-2238982 Lactuca sativa
Lsat_1_v5_gn_1_1740 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 2228983-2238982 Lactuca sativa
Lsat_1_v5_gn_1_1740 10.0kb downstream 10.0kb downstream 17330   true Lsat_1_v8_lg_1: 2211653-2228982 Lactuca sativa
Lsat_1_v5_gn_1_1740 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 2211653-2221652 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478907 5263 Asterids View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain