Gene : Lsat_1_v5_gn_1_33541 L. sativa V8
Defline:  (1 of 1) K14558 - periodic tryptophan protein 2 (PWP2, UTP1) Genomic Order:  1146
Name:  ? Lsat_1_v5_gn_1_33541 Secondary Identifier:  ? PAC:38947347
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_33541 0.5kb upstream 0.5kb upstream 3918   true Lsat_1_v8_lg_1: 39075196-39079113 Lactuca sativa
Lsat_1_v5_gn_1_33541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39078614-39079113 Lactuca sativa
Lsat_1_v5_gn_1_33541 0.5kb downstream 0.5kb downstream 3918   true Lsat_1_v8_lg_1: 39074696-39078613 Lactuca sativa
Lsat_1_v5_gn_1_33541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39074696-39075195 Lactuca sativa
Lsat_1_v5_gn_1_33541 1.0kb upstream 1.0kb upstream 4418   true Lsat_1_v8_lg_1: 39075196-39079613 Lactuca sativa
Lsat_1_v5_gn_1_33541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39078614-39079613 Lactuca sativa
Lsat_1_v5_gn_1_33541 1.0kb downstream 1.0kb downstream 4418   true Lsat_1_v8_lg_1: 39074196-39078613 Lactuca sativa
Lsat_1_v5_gn_1_33541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39074196-39075195 Lactuca sativa
Lsat_1_v5_gn_1_33541 2.0kb upstream 2.0kb upstream 5418   true Lsat_1_v8_lg_1: 39075196-39080613 Lactuca sativa
Lsat_1_v5_gn_1_33541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39078614-39080613 Lactuca sativa
Lsat_1_v5_gn_1_33541 2.0kb downstream 2.0kb downstream 5418   true Lsat_1_v8_lg_1: 39073196-39078613 Lactuca sativa
Lsat_1_v5_gn_1_33541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39073196-39075195 Lactuca sativa
Lsat_1_v5_gn_1_33541 5.0kb upstream 5.0kb upstream 8418   true Lsat_1_v8_lg_1: 39075196-39083613 Lactuca sativa
Lsat_1_v5_gn_1_33541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39078614-39083613 Lactuca sativa
Lsat_1_v5_gn_1_33541 5.0kb downstream 5.0kb downstream 8418   true Lsat_1_v8_lg_1: 39070196-39078613 Lactuca sativa
Lsat_1_v5_gn_1_33541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39070196-39075195 Lactuca sativa
Lsat_1_v5_gn_1_33541 10.0kb upstream 10.0kb upstream 13418   true Lsat_1_v8_lg_1: 39075196-39088613 Lactuca sativa
Lsat_1_v5_gn_1_33541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39078614-39088613 Lactuca sativa
Lsat_1_v5_gn_1_33541 10.0kb downstream 10.0kb downstream 13418   true Lsat_1_v8_lg_1: 39065196-39078613 Lactuca sativa
Lsat_1_v5_gn_1_33541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39065196-39075195 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480569 5263 Asterids View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain