Gene : Lsat_1_v5_gn_1_33801 L. sativa V8
Defline:  (1 of 1) PTHR33427//PTHR33427:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MQD17 Genomic Order:  1155
Name:  ? Lsat_1_v5_gn_1_33801 Secondary Identifier:  ? PAC:38944916
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_33801 0.5kb upstream 0.5kb upstream 3921   true Lsat_1_v8_lg_1: 39283131-39287051 Lactuca sativa
Lsat_1_v5_gn_1_33801 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39286552-39287051 Lactuca sativa
Lsat_1_v5_gn_1_33801 0.5kb downstream 0.5kb downstream 3921   true Lsat_1_v8_lg_1: 39282631-39286551 Lactuca sativa
Lsat_1_v5_gn_1_33801 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39282631-39283130 Lactuca sativa
Lsat_1_v5_gn_1_33801 1.0kb upstream 1.0kb upstream 4421   true Lsat_1_v8_lg_1: 39283131-39287551 Lactuca sativa
Lsat_1_v5_gn_1_33801 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39286552-39287551 Lactuca sativa
Lsat_1_v5_gn_1_33801 1.0kb downstream 1.0kb downstream 4421   true Lsat_1_v8_lg_1: 39282131-39286551 Lactuca sativa
Lsat_1_v5_gn_1_33801 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39282131-39283130 Lactuca sativa
Lsat_1_v5_gn_1_33801 2.0kb upstream 2.0kb upstream 5421   true Lsat_1_v8_lg_1: 39283131-39288551 Lactuca sativa
Lsat_1_v5_gn_1_33801 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39286552-39288551 Lactuca sativa
Lsat_1_v5_gn_1_33801 2.0kb downstream 2.0kb downstream 5421   true Lsat_1_v8_lg_1: 39281131-39286551 Lactuca sativa
Lsat_1_v5_gn_1_33801 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39281131-39283130 Lactuca sativa
Lsat_1_v5_gn_1_33801 5.0kb upstream 5.0kb upstream 8421   true Lsat_1_v8_lg_1: 39283131-39291551 Lactuca sativa
Lsat_1_v5_gn_1_33801 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39286552-39291551 Lactuca sativa
Lsat_1_v5_gn_1_33801 5.0kb downstream 5.0kb downstream 8421   true Lsat_1_v8_lg_1: 39278131-39286551 Lactuca sativa
Lsat_1_v5_gn_1_33801 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39278131-39283130 Lactuca sativa
Lsat_1_v5_gn_1_33801 10.0kb upstream 10.0kb upstream 13421   true Lsat_1_v8_lg_1: 39283131-39296551 Lactuca sativa
Lsat_1_v5_gn_1_33801 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39286552-39296551 Lactuca sativa
Lsat_1_v5_gn_1_33801 10.0kb downstream 10.0kb downstream 13421   true Lsat_1_v8_lg_1: 39273131-39286551 Lactuca sativa
Lsat_1_v5_gn_1_33801 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39273131-39283130 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473015 5263 Asterids View MSA
123746273 5271 Pentapetalae View MSA
122791628 5272 Eudicot View MSA
122044746 5273 Angiosperm View MSA
121349480 5274 Embryophyte View MSA
123381326 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain