Gene : Lsat_1_v5_gn_1_34401 L. sativa V8
Defline:  (1 of 1) PTHR32429:SF9 - POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE PROTEIN Genomic Order:  1129
Name:  ? Lsat_1_v5_gn_1_34401 Secondary Identifier:  ? PAC:38948398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_34401 0.5kb upstream 0.5kb upstream 2613   true Lsat_1_v8_lg_1: 38517489-38520101 Lactuca sativa
Lsat_1_v5_gn_1_34401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 38519602-38520101 Lactuca sativa
Lsat_1_v5_gn_1_34401 0.5kb downstream 0.5kb downstream 2613   true Lsat_1_v8_lg_1: 38516989-38519601 Lactuca sativa
Lsat_1_v5_gn_1_34401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 38516989-38517488 Lactuca sativa
Lsat_1_v5_gn_1_34401 1.0kb upstream 1.0kb upstream 3113   true Lsat_1_v8_lg_1: 38517489-38520601 Lactuca sativa
Lsat_1_v5_gn_1_34401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 38519602-38520601 Lactuca sativa
Lsat_1_v5_gn_1_34401 1.0kb downstream 1.0kb downstream 3113   true Lsat_1_v8_lg_1: 38516489-38519601 Lactuca sativa
Lsat_1_v5_gn_1_34401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 38516489-38517488 Lactuca sativa
Lsat_1_v5_gn_1_34401 2.0kb upstream 2.0kb upstream 4113   true Lsat_1_v8_lg_1: 38517489-38521601 Lactuca sativa
Lsat_1_v5_gn_1_34401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 38519602-38521601 Lactuca sativa
Lsat_1_v5_gn_1_34401 2.0kb downstream 2.0kb downstream 4113   true Lsat_1_v8_lg_1: 38515489-38519601 Lactuca sativa
Lsat_1_v5_gn_1_34401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 38515489-38517488 Lactuca sativa
Lsat_1_v5_gn_1_34401 5.0kb upstream 5.0kb upstream 7113   true Lsat_1_v8_lg_1: 38517489-38524601 Lactuca sativa
Lsat_1_v5_gn_1_34401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 38519602-38524601 Lactuca sativa
Lsat_1_v5_gn_1_34401 5.0kb downstream 5.0kb downstream 7113   true Lsat_1_v8_lg_1: 38512489-38519601 Lactuca sativa
Lsat_1_v5_gn_1_34401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 38512489-38517488 Lactuca sativa
Lsat_1_v5_gn_1_34401 10.0kb upstream 10.0kb upstream 12113   true Lsat_1_v8_lg_1: 38517489-38529601 Lactuca sativa
Lsat_1_v5_gn_1_34401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 38519602-38529601 Lactuca sativa
Lsat_1_v5_gn_1_34401 10.0kb downstream 10.0kb downstream 12113   true Lsat_1_v8_lg_1: 38507489-38519601 Lactuca sativa
Lsat_1_v5_gn_1_34401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 38507489-38517488 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466657 5263 Asterids View MSA
123736610 5271 Pentapetalae View MSA
122792298 5272 Eudicot View MSA
122045902 5273 Angiosperm View MSA
121346329 5274 Embryophyte View MSA
123380368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain