Gene : Lsat_1_v5_gn_1_35180 L. sativa V8
Defline:  (1 of 2) KOG4766 - Uncharacterized conserved protein Genomic Order:  1180
Name:  ? Lsat_1_v5_gn_1_35180 Secondary Identifier:  ? PAC:38944116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_35180 0.5kb upstream 0.5kb upstream 3522   true Lsat_1_v8_lg_1: 39955248-39958769 Lactuca sativa
Lsat_1_v5_gn_1_35180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39955248-39955747 Lactuca sativa
Lsat_1_v5_gn_1_35180 0.5kb downstream 0.5kb downstream 3522   true Lsat_1_v8_lg_1: 39955748-39959269 Lactuca sativa
Lsat_1_v5_gn_1_35180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39958770-39959269 Lactuca sativa
Lsat_1_v5_gn_1_35180 1.0kb upstream 1.0kb upstream 4022   true Lsat_1_v8_lg_1: 39954748-39958769 Lactuca sativa
Lsat_1_v5_gn_1_35180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39954748-39955747 Lactuca sativa
Lsat_1_v5_gn_1_35180 1.0kb downstream 1.0kb downstream 4022   true Lsat_1_v8_lg_1: 39955748-39959769 Lactuca sativa
Lsat_1_v5_gn_1_35180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39958770-39959769 Lactuca sativa
Lsat_1_v5_gn_1_35180 2.0kb upstream 2.0kb upstream 5022   true Lsat_1_v8_lg_1: 39953748-39958769 Lactuca sativa
Lsat_1_v5_gn_1_35180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39953748-39955747 Lactuca sativa
Lsat_1_v5_gn_1_35180 2.0kb downstream 2.0kb downstream 5022   true Lsat_1_v8_lg_1: 39955748-39960769 Lactuca sativa
Lsat_1_v5_gn_1_35180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39958770-39960769 Lactuca sativa
Lsat_1_v5_gn_1_35180 5.0kb upstream 5.0kb upstream 8022   true Lsat_1_v8_lg_1: 39950748-39958769 Lactuca sativa
Lsat_1_v5_gn_1_35180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39950748-39955747 Lactuca sativa
Lsat_1_v5_gn_1_35180 5.0kb downstream 5.0kb downstream 8022   true Lsat_1_v8_lg_1: 39955748-39963769 Lactuca sativa
Lsat_1_v5_gn_1_35180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39958770-39963769 Lactuca sativa
Lsat_1_v5_gn_1_35180 10.0kb upstream 10.0kb upstream 13022   true Lsat_1_v8_lg_1: 39945748-39958769 Lactuca sativa
Lsat_1_v5_gn_1_35180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39945748-39955747 Lactuca sativa
Lsat_1_v5_gn_1_35180 10.0kb downstream 10.0kb downstream 13022   true Lsat_1_v8_lg_1: 39955748-39968769 Lactuca sativa
Lsat_1_v5_gn_1_35180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39958770-39968769 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466949 5263 Asterids View MSA
123736760 5271 Pentapetalae View MSA
122795345 5272 Eudicot View MSA
122043328 5273 Angiosperm View MSA
121346242 5274 Embryophyte View MSA
123427938 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain