Gene : Lsat_1_v5_gn_1_35300 L. sativa V8
Defline:  (1 of 2) KOG4673 - Transcription factor TMF, TATA element modulatory factor Genomic Order:  1186
Name:  ? Lsat_1_v5_gn_1_35300 Secondary Identifier:  ? PAC:38942358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_35300 0.5kb upstream 0.5kb upstream 10138   true Lsat_1_v8_lg_1: 39988849-39998986 Lactuca sativa
Lsat_1_v5_gn_1_35300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 39988849-39989348 Lactuca sativa
Lsat_1_v5_gn_1_35300 0.5kb downstream 0.5kb downstream 10138   true Lsat_1_v8_lg_1: 39989349-39999486 Lactuca sativa
Lsat_1_v5_gn_1_35300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 39998987-39999486 Lactuca sativa
Lsat_1_v5_gn_1_35300 1.0kb upstream 1.0kb upstream 10638   true Lsat_1_v8_lg_1: 39988349-39998986 Lactuca sativa
Lsat_1_v5_gn_1_35300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 39988349-39989348 Lactuca sativa
Lsat_1_v5_gn_1_35300 1.0kb downstream 1.0kb downstream 10638   true Lsat_1_v8_lg_1: 39989349-39999986 Lactuca sativa
Lsat_1_v5_gn_1_35300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 39998987-39999986 Lactuca sativa
Lsat_1_v5_gn_1_35300 2.0kb upstream 2.0kb upstream 11638   true Lsat_1_v8_lg_1: 39987349-39998986 Lactuca sativa
Lsat_1_v5_gn_1_35300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 39987349-39989348 Lactuca sativa
Lsat_1_v5_gn_1_35300 2.0kb downstream 2.0kb downstream 11638   true Lsat_1_v8_lg_1: 39989349-40000986 Lactuca sativa
Lsat_1_v5_gn_1_35300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 39998987-40000986 Lactuca sativa
Lsat_1_v5_gn_1_35300 5.0kb upstream 5.0kb upstream 14638   true Lsat_1_v8_lg_1: 39984349-39998986 Lactuca sativa
Lsat_1_v5_gn_1_35300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 39984349-39989348 Lactuca sativa
Lsat_1_v5_gn_1_35300 5.0kb downstream 5.0kb downstream 14638   true Lsat_1_v8_lg_1: 39989349-40003986 Lactuca sativa
Lsat_1_v5_gn_1_35300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 39998987-40003986 Lactuca sativa
Lsat_1_v5_gn_1_35300 10.0kb upstream 10.0kb upstream 19638   true Lsat_1_v8_lg_1: 39979349-39998986 Lactuca sativa
Lsat_1_v5_gn_1_35300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 39979349-39989348 Lactuca sativa
Lsat_1_v5_gn_1_35300 10.0kb downstream 10.0kb downstream 19638   true Lsat_1_v8_lg_1: 39989349-40008986 Lactuca sativa
Lsat_1_v5_gn_1_35300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 39998987-40008986 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473159 5263 Asterids View MSA
123748834 5271 Pentapetalae View MSA
122790742 5272 Eudicot View MSA
122045363 5273 Angiosperm View MSA
121349790 5274 Embryophyte View MSA
123428716 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain