Gene : Lsat_1_v5_gn_1_35540 L. sativa V8
Defline:  (1 of 1) PTHR11353//PTHR11353:SF85//PTHR11552//PTHR11552:SF69 - CHAPERONIN // CHAPERONIN CPN60-LIKE 2, MITOCHONDRIAL // GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE // PROTEIN HOTHEAD Genomic Order:  1256
Name:  ? Lsat_1_v5_gn_1_35540 Secondary Identifier:  ? PAC:38942940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_35540 0.5kb upstream 0.5kb upstream 7976   true Lsat_1_v8_lg_1: 42136198-42144173 Lactuca sativa
Lsat_1_v5_gn_1_35540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 42143674-42144173 Lactuca sativa
Lsat_1_v5_gn_1_35540 0.5kb downstream 0.5kb downstream 7976   true Lsat_1_v8_lg_1: 42135698-42143673 Lactuca sativa
Lsat_1_v5_gn_1_35540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 42135698-42136197 Lactuca sativa
Lsat_1_v5_gn_1_35540 1.0kb upstream 1.0kb upstream 8476   true Lsat_1_v8_lg_1: 42136198-42144673 Lactuca sativa
Lsat_1_v5_gn_1_35540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 42143674-42144673 Lactuca sativa
Lsat_1_v5_gn_1_35540 1.0kb downstream 1.0kb downstream 8476   true Lsat_1_v8_lg_1: 42135198-42143673 Lactuca sativa
Lsat_1_v5_gn_1_35540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 42135198-42136197 Lactuca sativa
Lsat_1_v5_gn_1_35540 2.0kb upstream 2.0kb upstream 9476   true Lsat_1_v8_lg_1: 42136198-42145673 Lactuca sativa
Lsat_1_v5_gn_1_35540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 42143674-42145673 Lactuca sativa
Lsat_1_v5_gn_1_35540 2.0kb downstream 2.0kb downstream 9476   true Lsat_1_v8_lg_1: 42134198-42143673 Lactuca sativa
Lsat_1_v5_gn_1_35540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 42134198-42136197 Lactuca sativa
Lsat_1_v5_gn_1_35540 5.0kb upstream 5.0kb upstream 12476   true Lsat_1_v8_lg_1: 42136198-42148673 Lactuca sativa
Lsat_1_v5_gn_1_35540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 42143674-42148673 Lactuca sativa
Lsat_1_v5_gn_1_35540 5.0kb downstream 5.0kb downstream 12476   true Lsat_1_v8_lg_1: 42131198-42143673 Lactuca sativa
Lsat_1_v5_gn_1_35540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 42131198-42136197 Lactuca sativa
Lsat_1_v5_gn_1_35540 10.0kb upstream 10.0kb upstream 17476   true Lsat_1_v8_lg_1: 42136198-42153673 Lactuca sativa
Lsat_1_v5_gn_1_35540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 42143674-42153673 Lactuca sativa
Lsat_1_v5_gn_1_35540 10.0kb downstream 10.0kb downstream 17476   true Lsat_1_v8_lg_1: 42126198-42143673 Lactuca sativa
Lsat_1_v5_gn_1_35540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 42126198-42136197 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469634 5263 Asterids View MSA
123743454 5271 Pentapetalae View MSA
122794275 5272 Eudicot View MSA
122050268 5273 Angiosperm View MSA
121346016 5274 Embryophyte View MSA
123428427 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain