Gene : Lsat_1_v5_gn_1_35561 L. sativa V8
Defline:  (1 of 2) PTHR31301//PTHR31301:SF27 - FAMILY NOT NAMED // LOB DOMAIN-CONTAINING PROTEIN 22-RELATED Genomic Order:  1255
Name:  ? Lsat_1_v5_gn_1_35561 Secondary Identifier:  ? PAC:38943233
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_35561 0.5kb upstream 0.5kb upstream 1720   true Lsat_1_v8_lg_1: 42134134-42135853 Lactuca sativa
Lsat_1_v5_gn_1_35561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 42134134-42134633 Lactuca sativa
Lsat_1_v5_gn_1_35561 0.5kb downstream 0.5kb downstream 1720   true Lsat_1_v8_lg_1: 42134634-42136353 Lactuca sativa
Lsat_1_v5_gn_1_35561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 42135854-42136353 Lactuca sativa
Lsat_1_v5_gn_1_35561 1.0kb upstream 1.0kb upstream 2220   true Lsat_1_v8_lg_1: 42133634-42135853 Lactuca sativa
Lsat_1_v5_gn_1_35561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 42133634-42134633 Lactuca sativa
Lsat_1_v5_gn_1_35561 1.0kb downstream 1.0kb downstream 2220   true Lsat_1_v8_lg_1: 42134634-42136853 Lactuca sativa
Lsat_1_v5_gn_1_35561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 42135854-42136853 Lactuca sativa
Lsat_1_v5_gn_1_35561 2.0kb upstream 2.0kb upstream 3220   true Lsat_1_v8_lg_1: 42132634-42135853 Lactuca sativa
Lsat_1_v5_gn_1_35561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 42132634-42134633 Lactuca sativa
Lsat_1_v5_gn_1_35561 2.0kb downstream 2.0kb downstream 3220   true Lsat_1_v8_lg_1: 42134634-42137853 Lactuca sativa
Lsat_1_v5_gn_1_35561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 42135854-42137853 Lactuca sativa
Lsat_1_v5_gn_1_35561 5.0kb upstream 5.0kb upstream 6220   true Lsat_1_v8_lg_1: 42129634-42135853 Lactuca sativa
Lsat_1_v5_gn_1_35561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 42129634-42134633 Lactuca sativa
Lsat_1_v5_gn_1_35561 5.0kb downstream 5.0kb downstream 6220   true Lsat_1_v8_lg_1: 42134634-42140853 Lactuca sativa
Lsat_1_v5_gn_1_35561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 42135854-42140853 Lactuca sativa
Lsat_1_v5_gn_1_35561 10.0kb upstream 10.0kb upstream 11220   true Lsat_1_v8_lg_1: 42124634-42135853 Lactuca sativa
Lsat_1_v5_gn_1_35561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 42124634-42134633 Lactuca sativa
Lsat_1_v5_gn_1_35561 10.0kb downstream 10.0kb downstream 11220   true Lsat_1_v8_lg_1: 42134634-42145853 Lactuca sativa
Lsat_1_v5_gn_1_35561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 42135854-42145853 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469947 5263 Asterids View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain