Gene : Lsat_1_v5_gn_1_36540 L. sativa V8
Defline:  (1 of 2) PTHR11014//PTHR11014:SF55 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  1220
Name:  ? Lsat_1_v5_gn_1_36540 Secondary Identifier:  ? PAC:38948572
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_36540 0.5kb upstream 0.5kb upstream 3086   true Lsat_1_v8_lg_1: 41132271-41135356 Lactuca sativa
Lsat_1_v5_gn_1_36540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 41132271-41132770 Lactuca sativa
Lsat_1_v5_gn_1_36540 0.5kb downstream 0.5kb downstream 3086   true Lsat_1_v8_lg_1: 41132771-41135856 Lactuca sativa
Lsat_1_v5_gn_1_36540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 41135357-41135856 Lactuca sativa
Lsat_1_v5_gn_1_36540 1.0kb upstream 1.0kb upstream 3586   true Lsat_1_v8_lg_1: 41131771-41135356 Lactuca sativa
Lsat_1_v5_gn_1_36540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 41131771-41132770 Lactuca sativa
Lsat_1_v5_gn_1_36540 1.0kb downstream 1.0kb downstream 3586   true Lsat_1_v8_lg_1: 41132771-41136356 Lactuca sativa
Lsat_1_v5_gn_1_36540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 41135357-41136356 Lactuca sativa
Lsat_1_v5_gn_1_36540 2.0kb upstream 2.0kb upstream 4586   true Lsat_1_v8_lg_1: 41130771-41135356 Lactuca sativa
Lsat_1_v5_gn_1_36540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 41130771-41132770 Lactuca sativa
Lsat_1_v5_gn_1_36540 2.0kb downstream 2.0kb downstream 4586   true Lsat_1_v8_lg_1: 41132771-41137356 Lactuca sativa
Lsat_1_v5_gn_1_36540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 41135357-41137356 Lactuca sativa
Lsat_1_v5_gn_1_36540 5.0kb upstream 5.0kb upstream 7586   true Lsat_1_v8_lg_1: 41127771-41135356 Lactuca sativa
Lsat_1_v5_gn_1_36540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 41127771-41132770 Lactuca sativa
Lsat_1_v5_gn_1_36540 5.0kb downstream 5.0kb downstream 7586   true Lsat_1_v8_lg_1: 41132771-41140356 Lactuca sativa
Lsat_1_v5_gn_1_36540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 41135357-41140356 Lactuca sativa
Lsat_1_v5_gn_1_36540 10.0kb upstream 10.0kb upstream 12586   true Lsat_1_v8_lg_1: 41122771-41135356 Lactuca sativa
Lsat_1_v5_gn_1_36540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 41122771-41132770 Lactuca sativa
Lsat_1_v5_gn_1_36540 10.0kb downstream 10.0kb downstream 12586   true Lsat_1_v8_lg_1: 41132771-41145356 Lactuca sativa
Lsat_1_v5_gn_1_36540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 41135357-41145356 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464252 5263 Asterids View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain