Gene : Lsat_1_v5_gn_1_3701 L. sativa V8
Defline:  (1 of 7) PTHR31279//PTHR31279:SF3 - FAMILY NOT NAMED // (PHI-1) PROTEIN, PUTATIVE-RELATED Genomic Order:  112
Name:  ? Lsat_1_v5_gn_1_3701 Secondary Identifier:  ? PAC:38943089
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_3701 0.5kb upstream 0.5kb upstream 1463   true Lsat_1_v8_lg_1: 4263217-4264679 Lactuca sativa
Lsat_1_v5_gn_1_3701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 4264180-4264679 Lactuca sativa
Lsat_1_v5_gn_1_3701 0.5kb downstream 0.5kb downstream 1463   true Lsat_1_v8_lg_1: 4262717-4264179 Lactuca sativa
Lsat_1_v5_gn_1_3701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 4262717-4263216 Lactuca sativa
Lsat_1_v5_gn_1_3701 1.0kb upstream 1.0kb upstream 1963   true Lsat_1_v8_lg_1: 4263217-4265179 Lactuca sativa
Lsat_1_v5_gn_1_3701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 4264180-4265179 Lactuca sativa
Lsat_1_v5_gn_1_3701 1.0kb downstream 1.0kb downstream 1963   true Lsat_1_v8_lg_1: 4262217-4264179 Lactuca sativa
Lsat_1_v5_gn_1_3701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 4262217-4263216 Lactuca sativa
Lsat_1_v5_gn_1_3701 2.0kb upstream 2.0kb upstream 2963   true Lsat_1_v8_lg_1: 4263217-4266179 Lactuca sativa
Lsat_1_v5_gn_1_3701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 4264180-4266179 Lactuca sativa
Lsat_1_v5_gn_1_3701 2.0kb downstream 2.0kb downstream 2963   true Lsat_1_v8_lg_1: 4261217-4264179 Lactuca sativa
Lsat_1_v5_gn_1_3701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 4261217-4263216 Lactuca sativa
Lsat_1_v5_gn_1_3701 5.0kb upstream 5.0kb upstream 5963   true Lsat_1_v8_lg_1: 4263217-4269179 Lactuca sativa
Lsat_1_v5_gn_1_3701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 4264180-4269179 Lactuca sativa
Lsat_1_v5_gn_1_3701 5.0kb downstream 5.0kb downstream 5963   true Lsat_1_v8_lg_1: 4258217-4264179 Lactuca sativa
Lsat_1_v5_gn_1_3701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 4258217-4263216 Lactuca sativa
Lsat_1_v5_gn_1_3701 10.0kb upstream 10.0kb upstream 10963   true Lsat_1_v8_lg_1: 4263217-4274179 Lactuca sativa
Lsat_1_v5_gn_1_3701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 4264180-4274179 Lactuca sativa
Lsat_1_v5_gn_1_3701 10.0kb downstream 10.0kb downstream 10963   true Lsat_1_v8_lg_1: 4253217-4264179 Lactuca sativa
Lsat_1_v5_gn_1_3701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 4253217-4263216 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479055 5263 Asterids View MSA
123747459 5271 Pentapetalae View MSA
122794383 5272 Eudicot View MSA
122046837 5273 Angiosperm View MSA
121351467 5274 Embryophyte View MSA
123382178 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain