Gene : Lsat_1_v5_gn_1_37780 L. sativa V8

Defline:  (1 of 1) KOG0860 - Synaptobrevin/VAMP-like protein Genomic Order:  1304
Name:  ? Lsat_1_v5_gn_1_37780 Secondary Identifier:  ? PAC:38942574

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_37780 0.5kb upstream 0.5kb upstream 2393   true Lsat_1_v8_lg_1: 43990326-43992718 Lactuca sativa
Lsat_1_v5_gn_1_37780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 43992219-43992718 Lactuca sativa
Lsat_1_v5_gn_1_37780 0.5kb downstream 0.5kb downstream 2393   true Lsat_1_v8_lg_1: 43989826-43992218 Lactuca sativa
Lsat_1_v5_gn_1_37780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 43989826-43990325 Lactuca sativa
Lsat_1_v5_gn_1_37780 1.0kb upstream 1.0kb upstream 2893   true Lsat_1_v8_lg_1: 43990326-43993218 Lactuca sativa
Lsat_1_v5_gn_1_37780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 43992219-43993218 Lactuca sativa
Lsat_1_v5_gn_1_37780 1.0kb downstream 1.0kb downstream 2893   true Lsat_1_v8_lg_1: 43989326-43992218 Lactuca sativa
Lsat_1_v5_gn_1_37780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 43989326-43990325 Lactuca sativa
Lsat_1_v5_gn_1_37780 2.0kb upstream 2.0kb upstream 3893   true Lsat_1_v8_lg_1: 43990326-43994218 Lactuca sativa
Lsat_1_v5_gn_1_37780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 43992219-43994218 Lactuca sativa
Lsat_1_v5_gn_1_37780 2.0kb downstream 2.0kb downstream 3893   true Lsat_1_v8_lg_1: 43988326-43992218 Lactuca sativa
Lsat_1_v5_gn_1_37780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 43988326-43990325 Lactuca sativa
Lsat_1_v5_gn_1_37780 5.0kb upstream 5.0kb upstream 6893   true Lsat_1_v8_lg_1: 43990326-43997218 Lactuca sativa
Lsat_1_v5_gn_1_37780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 43992219-43997218 Lactuca sativa
Lsat_1_v5_gn_1_37780 5.0kb downstream 5.0kb downstream 6893   true Lsat_1_v8_lg_1: 43985326-43992218 Lactuca sativa
Lsat_1_v5_gn_1_37780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 43985326-43990325 Lactuca sativa
Lsat_1_v5_gn_1_37780 10.0kb upstream 10.0kb upstream 11893   true Lsat_1_v8_lg_1: 43990326-44002218 Lactuca sativa
Lsat_1_v5_gn_1_37780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 43992219-44002218 Lactuca sativa
Lsat_1_v5_gn_1_37780 10.0kb downstream 10.0kb downstream 11893   true Lsat_1_v8_lg_1: 43980326-43992218 Lactuca sativa
Lsat_1_v5_gn_1_37780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 43980326-43990325 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479897 5263 Asterids View MSA
123753791 5271 Pentapetalae View MSA
122788214 5272 Eudicot View MSA
122046474 5273 Angiosperm View MSA
121346313 5274 Embryophyte View MSA
123424515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain