Gene : Lsat_1_v5_gn_1_37680 L. sativa V8
Defline:  (1 of 4) PTHR24078//PTHR24078:SF193 - DNAJ HOMOLOG SUBFAMILY C MEMBER // DNAJ HOMOLOG SUBFAMILY C MEMBER 2 Genomic Order:  1308
Name:  ? Lsat_1_v5_gn_1_37680 Secondary Identifier:  ? PAC:38948125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_37680 0.5kb upstream 0.5kb upstream 5717   true Lsat_1_v8_lg_1: 44078969-44084685 Lactuca sativa
Lsat_1_v5_gn_1_37680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 44084186-44084685 Lactuca sativa
Lsat_1_v5_gn_1_37680 0.5kb downstream 0.5kb downstream 5717   true Lsat_1_v8_lg_1: 44078469-44084185 Lactuca sativa
Lsat_1_v5_gn_1_37680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 44078469-44078968 Lactuca sativa
Lsat_1_v5_gn_1_37680 1.0kb upstream 1.0kb upstream 6217   true Lsat_1_v8_lg_1: 44078969-44085185 Lactuca sativa
Lsat_1_v5_gn_1_37680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 44084186-44085185 Lactuca sativa
Lsat_1_v5_gn_1_37680 1.0kb downstream 1.0kb downstream 6217   true Lsat_1_v8_lg_1: 44077969-44084185 Lactuca sativa
Lsat_1_v5_gn_1_37680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 44077969-44078968 Lactuca sativa
Lsat_1_v5_gn_1_37680 2.0kb upstream 2.0kb upstream 7217   true Lsat_1_v8_lg_1: 44078969-44086185 Lactuca sativa
Lsat_1_v5_gn_1_37680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 44084186-44086185 Lactuca sativa
Lsat_1_v5_gn_1_37680 2.0kb downstream 2.0kb downstream 7217   true Lsat_1_v8_lg_1: 44076969-44084185 Lactuca sativa
Lsat_1_v5_gn_1_37680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 44076969-44078968 Lactuca sativa
Lsat_1_v5_gn_1_37680 5.0kb upstream 5.0kb upstream 10217   true Lsat_1_v8_lg_1: 44078969-44089185 Lactuca sativa
Lsat_1_v5_gn_1_37680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 44084186-44089185 Lactuca sativa
Lsat_1_v5_gn_1_37680 5.0kb downstream 5.0kb downstream 10217   true Lsat_1_v8_lg_1: 44073969-44084185 Lactuca sativa
Lsat_1_v5_gn_1_37680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 44073969-44078968 Lactuca sativa
Lsat_1_v5_gn_1_37680 10.0kb upstream 10.0kb upstream 15217   true Lsat_1_v8_lg_1: 44078969-44094185 Lactuca sativa
Lsat_1_v5_gn_1_37680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 44084186-44094185 Lactuca sativa
Lsat_1_v5_gn_1_37680 10.0kb downstream 10.0kb downstream 15217   true Lsat_1_v8_lg_1: 44068969-44084185 Lactuca sativa
Lsat_1_v5_gn_1_37680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 44068969-44078968 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469978 5263 Asterids View MSA
123742769 5271 Pentapetalae View MSA
122796885 5272 Eudicot View MSA
122048239 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121310900 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain