Gene : Lsat_1_v5_gn_1_38141 L. sativa V8

Defline:  (1 of 1) PTHR32467//PTHR32467:SF5 - FAMILY NOT NAMED // AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL1 Genomic Order:  1289
Name:  ? Lsat_1_v5_gn_1_38141 Secondary Identifier:  ? PAC:38944244

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_38141 0.5kb upstream 0.5kb upstream 4042   true Lsat_1_v8_lg_1: 43636440-43640481 Lactuca sativa
Lsat_1_v5_gn_1_38141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 43636440-43636939 Lactuca sativa
Lsat_1_v5_gn_1_38141 0.5kb downstream 0.5kb downstream 4042   true Lsat_1_v8_lg_1: 43636940-43640981 Lactuca sativa
Lsat_1_v5_gn_1_38141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 43640482-43640981 Lactuca sativa
Lsat_1_v5_gn_1_38141 1.0kb upstream 1.0kb upstream 4542   true Lsat_1_v8_lg_1: 43635940-43640481 Lactuca sativa
Lsat_1_v5_gn_1_38141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 43635940-43636939 Lactuca sativa
Lsat_1_v5_gn_1_38141 1.0kb downstream 1.0kb downstream 4542   true Lsat_1_v8_lg_1: 43636940-43641481 Lactuca sativa
Lsat_1_v5_gn_1_38141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 43640482-43641481 Lactuca sativa
Lsat_1_v5_gn_1_38141 2.0kb upstream 2.0kb upstream 5542   true Lsat_1_v8_lg_1: 43634940-43640481 Lactuca sativa
Lsat_1_v5_gn_1_38141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 43634940-43636939 Lactuca sativa
Lsat_1_v5_gn_1_38141 2.0kb downstream 2.0kb downstream 5542   true Lsat_1_v8_lg_1: 43636940-43642481 Lactuca sativa
Lsat_1_v5_gn_1_38141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 43640482-43642481 Lactuca sativa
Lsat_1_v5_gn_1_38141 5.0kb upstream 5.0kb upstream 8542   true Lsat_1_v8_lg_1: 43631940-43640481 Lactuca sativa
Lsat_1_v5_gn_1_38141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 43631940-43636939 Lactuca sativa
Lsat_1_v5_gn_1_38141 5.0kb downstream 5.0kb downstream 8542   true Lsat_1_v8_lg_1: 43636940-43645481 Lactuca sativa
Lsat_1_v5_gn_1_38141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 43640482-43645481 Lactuca sativa
Lsat_1_v5_gn_1_38141 10.0kb upstream 10.0kb upstream 13542   true Lsat_1_v8_lg_1: 43626940-43640481 Lactuca sativa
Lsat_1_v5_gn_1_38141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 43626940-43636939 Lactuca sativa
Lsat_1_v5_gn_1_38141 10.0kb downstream 10.0kb downstream 13542   true Lsat_1_v8_lg_1: 43636940-43650481 Lactuca sativa
Lsat_1_v5_gn_1_38141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 43640482-43650481 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041266 5273 Angiosperm View MSA
121469900 5263 Asterids View MSA
123744753 5271 Pentapetalae View MSA
122796113 5272 Eudicot View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain