Gene : Lsat_1_v5_gn_1_38660 L. sativa V8
Defline:  (1 of 2) K02110 - F-type H+-transporting ATPase subunit c (ATPF0C, atpE) Genomic Order:  1315
Name:  ? Lsat_1_v5_gn_1_38660 Secondary Identifier:  ? PAC:38945921
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7219 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_38660 0.5kb upstream 0.5kb upstream 854   true Lsat_1_v8_lg_1: 44401542-44402395 Lactuca sativa
Lsat_1_v5_gn_1_38660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 44401542-44402041 Lactuca sativa
Lsat_1_v5_gn_1_38660 0.5kb downstream 0.5kb downstream 854   true Lsat_1_v8_lg_1: 44402042-44402895 Lactuca sativa
Lsat_1_v5_gn_1_38660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 44402396-44402895 Lactuca sativa
Lsat_1_v5_gn_1_38660 1.0kb upstream 1.0kb upstream 1354   true Lsat_1_v8_lg_1: 44401042-44402395 Lactuca sativa
Lsat_1_v5_gn_1_38660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 44401042-44402041 Lactuca sativa
Lsat_1_v5_gn_1_38660 1.0kb downstream 1.0kb downstream 1354   true Lsat_1_v8_lg_1: 44402042-44403395 Lactuca sativa
Lsat_1_v5_gn_1_38660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 44402396-44403395 Lactuca sativa
Lsat_1_v5_gn_1_38660 2.0kb upstream 2.0kb upstream 2354   true Lsat_1_v8_lg_1: 44400042-44402395 Lactuca sativa
Lsat_1_v5_gn_1_38660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 44400042-44402041 Lactuca sativa
Lsat_1_v5_gn_1_38660 2.0kb downstream 2.0kb downstream 2354   true Lsat_1_v8_lg_1: 44402042-44404395 Lactuca sativa
Lsat_1_v5_gn_1_38660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 44402396-44404395 Lactuca sativa
Lsat_1_v5_gn_1_38660 5.0kb upstream 5.0kb upstream 5354   true Lsat_1_v8_lg_1: 44397042-44402395 Lactuca sativa
Lsat_1_v5_gn_1_38660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 44397042-44402041 Lactuca sativa
Lsat_1_v5_gn_1_38660 5.0kb downstream 5.0kb downstream 5354   true Lsat_1_v8_lg_1: 44402042-44407395 Lactuca sativa
Lsat_1_v5_gn_1_38660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 44402396-44407395 Lactuca sativa
Lsat_1_v5_gn_1_38660 10.0kb upstream 10.0kb upstream 10354   true Lsat_1_v8_lg_1: 44392042-44402395 Lactuca sativa
Lsat_1_v5_gn_1_38660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 44392042-44402041 Lactuca sativa
Lsat_1_v5_gn_1_38660 10.0kb downstream 10.0kb downstream 10354   true Lsat_1_v8_lg_1: 44402042-44412395 Lactuca sativa
Lsat_1_v5_gn_1_38660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 44402396-44412395 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
121477444 5263 Asterids View MSA
123751411 5271 Pentapetalae View MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain