Gene : Lsat_1_v5_gn_1_38241 L. sativa V8
Defline:  (1 of 1) 2.7.6.5//3.2.1.37//3.2.1.55 - GTP diphosphokinase / Stringent factor // Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  1286
Name:  ? Lsat_1_v5_gn_1_38241 Secondary Identifier:  ? PAC:38943232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_38241 0.5kb upstream 0.5kb upstream 3499   true Lsat_1_v8_lg_1: 43529156-43532654 Lactuca sativa
Lsat_1_v5_gn_1_38241 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 43529156-43529655 Lactuca sativa
Lsat_1_v5_gn_1_38241 0.5kb downstream 0.5kb downstream 3499   true Lsat_1_v8_lg_1: 43529656-43533154 Lactuca sativa
Lsat_1_v5_gn_1_38241 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 43532655-43533154 Lactuca sativa
Lsat_1_v5_gn_1_38241 1.0kb upstream 1.0kb upstream 3999   true Lsat_1_v8_lg_1: 43528656-43532654 Lactuca sativa
Lsat_1_v5_gn_1_38241 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 43528656-43529655 Lactuca sativa
Lsat_1_v5_gn_1_38241 1.0kb downstream 1.0kb downstream 3999   true Lsat_1_v8_lg_1: 43529656-43533654 Lactuca sativa
Lsat_1_v5_gn_1_38241 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 43532655-43533654 Lactuca sativa
Lsat_1_v5_gn_1_38241 2.0kb upstream 2.0kb upstream 4999   true Lsat_1_v8_lg_1: 43527656-43532654 Lactuca sativa
Lsat_1_v5_gn_1_38241 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 43527656-43529655 Lactuca sativa
Lsat_1_v5_gn_1_38241 2.0kb downstream 2.0kb downstream 4999   true Lsat_1_v8_lg_1: 43529656-43534654 Lactuca sativa
Lsat_1_v5_gn_1_38241 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 43532655-43534654 Lactuca sativa
Lsat_1_v5_gn_1_38241 5.0kb upstream 5.0kb upstream 7999   true Lsat_1_v8_lg_1: 43524656-43532654 Lactuca sativa
Lsat_1_v5_gn_1_38241 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 43524656-43529655 Lactuca sativa
Lsat_1_v5_gn_1_38241 5.0kb downstream 5.0kb downstream 7999   true Lsat_1_v8_lg_1: 43529656-43537654 Lactuca sativa
Lsat_1_v5_gn_1_38241 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 43532655-43537654 Lactuca sativa
Lsat_1_v5_gn_1_38241 10.0kb upstream 10.0kb upstream 12999   true Lsat_1_v8_lg_1: 43519656-43532654 Lactuca sativa
Lsat_1_v5_gn_1_38241 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 43519656-43529655 Lactuca sativa
Lsat_1_v5_gn_1_38241 10.0kb downstream 10.0kb downstream 12999   true Lsat_1_v8_lg_1: 43529656-43542654 Lactuca sativa
Lsat_1_v5_gn_1_38241 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 43532655-43542654 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473194 5263 Asterids View MSA
123738848 5271 Pentapetalae View MSA
122789814 5272 Eudicot View MSA
122044078 5273 Angiosperm View MSA
121346145 5274 Embryophyte View MSA
123428478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain