Gene : Lsat_1_v5_gn_1_28101 L. sativa V8
Defline:  (1 of 1) KOG2991 - Splicing regulator Genomic Order:  922
Name:  ? Lsat_1_v5_gn_1_28101 Secondary Identifier:  ? PAC:38947076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_28101 0.5kb upstream 0.5kb upstream 4615   true Lsat_1_v8_lg_1: 31584967-31589581 Lactuca sativa
Lsat_1_v5_gn_1_28101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 31584967-31585466 Lactuca sativa
Lsat_1_v5_gn_1_28101 0.5kb downstream 0.5kb downstream 4615   true Lsat_1_v8_lg_1: 31585467-31590081 Lactuca sativa
Lsat_1_v5_gn_1_28101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 31589582-31590081 Lactuca sativa
Lsat_1_v5_gn_1_28101 1.0kb upstream 1.0kb upstream 5115   true Lsat_1_v8_lg_1: 31584467-31589581 Lactuca sativa
Lsat_1_v5_gn_1_28101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 31584467-31585466 Lactuca sativa
Lsat_1_v5_gn_1_28101 1.0kb downstream 1.0kb downstream 5115   true Lsat_1_v8_lg_1: 31585467-31590581 Lactuca sativa
Lsat_1_v5_gn_1_28101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 31589582-31590581 Lactuca sativa
Lsat_1_v5_gn_1_28101 2.0kb upstream 2.0kb upstream 6115   true Lsat_1_v8_lg_1: 31583467-31589581 Lactuca sativa
Lsat_1_v5_gn_1_28101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 31583467-31585466 Lactuca sativa
Lsat_1_v5_gn_1_28101 2.0kb downstream 2.0kb downstream 6115   true Lsat_1_v8_lg_1: 31585467-31591581 Lactuca sativa
Lsat_1_v5_gn_1_28101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 31589582-31591581 Lactuca sativa
Lsat_1_v5_gn_1_28101 5.0kb upstream 5.0kb upstream 9115   true Lsat_1_v8_lg_1: 31580467-31589581 Lactuca sativa
Lsat_1_v5_gn_1_28101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 31580467-31585466 Lactuca sativa
Lsat_1_v5_gn_1_28101 5.0kb downstream 5.0kb downstream 9115   true Lsat_1_v8_lg_1: 31585467-31594581 Lactuca sativa
Lsat_1_v5_gn_1_28101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 31589582-31594581 Lactuca sativa
Lsat_1_v5_gn_1_28101 10.0kb upstream 10.0kb upstream 14115   true Lsat_1_v8_lg_1: 31575467-31589581 Lactuca sativa
Lsat_1_v5_gn_1_28101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 31575467-31585466 Lactuca sativa
Lsat_1_v5_gn_1_28101 10.0kb downstream 10.0kb downstream 14115   true Lsat_1_v8_lg_1: 31585467-31599581 Lactuca sativa
Lsat_1_v5_gn_1_28101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 31589582-31599581 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474455 5263 Asterids View MSA
123743181 5271 Pentapetalae View MSA
122795045 5272 Eudicot View MSA
122047600 5273 Angiosperm View MSA
123429059 5275 Viridiplantae View MSA
121346918 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain