Gene : Lsat_1_v5_gn_1_29040 L. sativa V8
Defline:  (1 of 3) PTHR12381 - RIBONUCLEOPROTEIN Genomic Order:  992
Name:  ? Lsat_1_v5_gn_1_29040 Secondary Identifier:  ? PAC:38943530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_29040 0.5kb upstream 0.5kb upstream 3116   true Lsat_1_v8_lg_1: 33551218-33554333 Lactuca sativa
Lsat_1_v5_gn_1_29040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 33553834-33554333 Lactuca sativa
Lsat_1_v5_gn_1_29040 0.5kb downstream 0.5kb downstream 3116   true Lsat_1_v8_lg_1: 33550718-33553833 Lactuca sativa
Lsat_1_v5_gn_1_29040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 33550718-33551217 Lactuca sativa
Lsat_1_v5_gn_1_29040 1.0kb upstream 1.0kb upstream 3616   true Lsat_1_v8_lg_1: 33551218-33554833 Lactuca sativa
Lsat_1_v5_gn_1_29040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 33553834-33554833 Lactuca sativa
Lsat_1_v5_gn_1_29040 1.0kb downstream 1.0kb downstream 3616   true Lsat_1_v8_lg_1: 33550218-33553833 Lactuca sativa
Lsat_1_v5_gn_1_29040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 33550218-33551217 Lactuca sativa
Lsat_1_v5_gn_1_29040 2.0kb upstream 2.0kb upstream 4616   true Lsat_1_v8_lg_1: 33551218-33555833 Lactuca sativa
Lsat_1_v5_gn_1_29040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 33553834-33555833 Lactuca sativa
Lsat_1_v5_gn_1_29040 2.0kb downstream 2.0kb downstream 4616   true Lsat_1_v8_lg_1: 33549218-33553833 Lactuca sativa
Lsat_1_v5_gn_1_29040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 33549218-33551217 Lactuca sativa
Lsat_1_v5_gn_1_29040 5.0kb upstream 5.0kb upstream 7616   true Lsat_1_v8_lg_1: 33551218-33558833 Lactuca sativa
Lsat_1_v5_gn_1_29040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 33553834-33558833 Lactuca sativa
Lsat_1_v5_gn_1_29040 5.0kb downstream 5.0kb downstream 7616   true Lsat_1_v8_lg_1: 33546218-33553833 Lactuca sativa
Lsat_1_v5_gn_1_29040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 33546218-33551217 Lactuca sativa
Lsat_1_v5_gn_1_29040 10.0kb upstream 10.0kb upstream 12616   true Lsat_1_v8_lg_1: 33551218-33563833 Lactuca sativa
Lsat_1_v5_gn_1_29040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 33553834-33563833 Lactuca sativa
Lsat_1_v5_gn_1_29040 10.0kb downstream 10.0kb downstream 12616   true Lsat_1_v8_lg_1: 33541218-33553833 Lactuca sativa
Lsat_1_v5_gn_1_29040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 33541218-33551217 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468233 5263 Asterids View MSA
123746630 5271 Pentapetalae View MSA
122792914 5272 Eudicot View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain