Gene : Lsat_1_v5_gn_1_29280 L. sativa V8
Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  982
Name:  ? Lsat_1_v5_gn_1_29280 Secondary Identifier:  ? PAC:38945407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_29280 0.5kb upstream 0.5kb upstream 3679   true Lsat_1_v8_lg_1: 33363623-33367301 Lactuca sativa
Lsat_1_v5_gn_1_29280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 33366802-33367301 Lactuca sativa
Lsat_1_v5_gn_1_29280 0.5kb downstream 0.5kb downstream 3679   true Lsat_1_v8_lg_1: 33363123-33366801 Lactuca sativa
Lsat_1_v5_gn_1_29280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 33363123-33363622 Lactuca sativa
Lsat_1_v5_gn_1_29280 1.0kb upstream 1.0kb upstream 4179   true Lsat_1_v8_lg_1: 33363623-33367801 Lactuca sativa
Lsat_1_v5_gn_1_29280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 33366802-33367801 Lactuca sativa
Lsat_1_v5_gn_1_29280 1.0kb downstream 1.0kb downstream 4179   true Lsat_1_v8_lg_1: 33362623-33366801 Lactuca sativa
Lsat_1_v5_gn_1_29280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 33362623-33363622 Lactuca sativa
Lsat_1_v5_gn_1_29280 2.0kb upstream 2.0kb upstream 5179   true Lsat_1_v8_lg_1: 33363623-33368801 Lactuca sativa
Lsat_1_v5_gn_1_29280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 33366802-33368801 Lactuca sativa
Lsat_1_v5_gn_1_29280 2.0kb downstream 2.0kb downstream 5179   true Lsat_1_v8_lg_1: 33361623-33366801 Lactuca sativa
Lsat_1_v5_gn_1_29280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 33361623-33363622 Lactuca sativa
Lsat_1_v5_gn_1_29280 5.0kb upstream 5.0kb upstream 8179   true Lsat_1_v8_lg_1: 33363623-33371801 Lactuca sativa
Lsat_1_v5_gn_1_29280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 33366802-33371801 Lactuca sativa
Lsat_1_v5_gn_1_29280 5.0kb downstream 5.0kb downstream 8179   true Lsat_1_v8_lg_1: 33358623-33366801 Lactuca sativa
Lsat_1_v5_gn_1_29280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 33358623-33363622 Lactuca sativa
Lsat_1_v5_gn_1_29280 10.0kb upstream 10.0kb upstream 13179   true Lsat_1_v8_lg_1: 33363623-33376801 Lactuca sativa
Lsat_1_v5_gn_1_29280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 33366802-33376801 Lactuca sativa
Lsat_1_v5_gn_1_29280 10.0kb downstream 10.0kb downstream 13179   true Lsat_1_v8_lg_1: 33353623-33366801 Lactuca sativa
Lsat_1_v5_gn_1_29280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 33353623-33363622 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475735 5263 Asterids View MSA
123741433 5271 Pentapetalae View MSA
122793119 5272 Eudicot View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain