Gene : Lsat_1_v5_gn_1_32000 L. sativa V8
Defline:  (1 of 1) PTHR23198:SF0 - NUCLEAR PORE COMPLEX PROTEIN NUP96 HOMOLOG Genomic Order:  1086
Name:  ? Lsat_1_v5_gn_1_32000 Secondary Identifier:  ? PAC:38942369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_32000 0.5kb upstream 0.5kb upstream 5086   true Lsat_1_v8_lg_1: 37032708-37037793 Lactuca sativa
Lsat_1_v5_gn_1_32000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 37037294-37037793 Lactuca sativa
Lsat_1_v5_gn_1_32000 0.5kb downstream 0.5kb downstream 5086   true Lsat_1_v8_lg_1: 37032208-37037293 Lactuca sativa
Lsat_1_v5_gn_1_32000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 37032208-37032707 Lactuca sativa
Lsat_1_v5_gn_1_32000 1.0kb upstream 1.0kb upstream 5586   true Lsat_1_v8_lg_1: 37032708-37038293 Lactuca sativa
Lsat_1_v5_gn_1_32000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 37037294-37038293 Lactuca sativa
Lsat_1_v5_gn_1_32000 1.0kb downstream 1.0kb downstream 5586   true Lsat_1_v8_lg_1: 37031708-37037293 Lactuca sativa
Lsat_1_v5_gn_1_32000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 37031708-37032707 Lactuca sativa
Lsat_1_v5_gn_1_32000 2.0kb upstream 2.0kb upstream 6586   true Lsat_1_v8_lg_1: 37032708-37039293 Lactuca sativa
Lsat_1_v5_gn_1_32000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 37037294-37039293 Lactuca sativa
Lsat_1_v5_gn_1_32000 2.0kb downstream 2.0kb downstream 6586   true Lsat_1_v8_lg_1: 37030708-37037293 Lactuca sativa
Lsat_1_v5_gn_1_32000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 37030708-37032707 Lactuca sativa
Lsat_1_v5_gn_1_32000 5.0kb upstream 5.0kb upstream 9586   true Lsat_1_v8_lg_1: 37032708-37042293 Lactuca sativa
Lsat_1_v5_gn_1_32000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 37037294-37042293 Lactuca sativa
Lsat_1_v5_gn_1_32000 5.0kb downstream 5.0kb downstream 9586   true Lsat_1_v8_lg_1: 37027708-37037293 Lactuca sativa
Lsat_1_v5_gn_1_32000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 37027708-37032707 Lactuca sativa
Lsat_1_v5_gn_1_32000 10.0kb upstream 10.0kb upstream 14586   true Lsat_1_v8_lg_1: 37032708-37047293 Lactuca sativa
Lsat_1_v5_gn_1_32000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 37037294-37047293 Lactuca sativa
Lsat_1_v5_gn_1_32000 10.0kb downstream 10.0kb downstream 14586   true Lsat_1_v8_lg_1: 37022708-37037293 Lactuca sativa
Lsat_1_v5_gn_1_32000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 37022708-37032707 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474701 5263 Asterids View MSA
123738828 5271 Pentapetalae View MSA
122786921 5272 Eudicot View MSA
122043247 5273 Angiosperm View MSA
121310093 5274 Embryophyte View MSA
123347679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain