Gene : Lsat_1_v5_gn_1_33221 L. sativa V8
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  1000
Name:  ? Lsat_1_v5_gn_1_33221 Secondary Identifier:  ? PAC:38943497
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_33221 0.5kb upstream 0.5kb upstream 3650   true Lsat_1_v8_lg_1: 33642919-33646568 Lactuca sativa
Lsat_1_v5_gn_1_33221 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 33642919-33643418 Lactuca sativa
Lsat_1_v5_gn_1_33221 0.5kb downstream 0.5kb downstream 3650   true Lsat_1_v8_lg_1: 33643419-33647068 Lactuca sativa
Lsat_1_v5_gn_1_33221 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 33646569-33647068 Lactuca sativa
Lsat_1_v5_gn_1_33221 1.0kb upstream 1.0kb upstream 4150   true Lsat_1_v8_lg_1: 33642419-33646568 Lactuca sativa
Lsat_1_v5_gn_1_33221 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 33642419-33643418 Lactuca sativa
Lsat_1_v5_gn_1_33221 1.0kb downstream 1.0kb downstream 4150   true Lsat_1_v8_lg_1: 33643419-33647568 Lactuca sativa
Lsat_1_v5_gn_1_33221 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 33646569-33647568 Lactuca sativa
Lsat_1_v5_gn_1_33221 2.0kb upstream 2.0kb upstream 5150   true Lsat_1_v8_lg_1: 33641419-33646568 Lactuca sativa
Lsat_1_v5_gn_1_33221 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 33641419-33643418 Lactuca sativa
Lsat_1_v5_gn_1_33221 2.0kb downstream 2.0kb downstream 5150   true Lsat_1_v8_lg_1: 33643419-33648568 Lactuca sativa
Lsat_1_v5_gn_1_33221 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 33646569-33648568 Lactuca sativa
Lsat_1_v5_gn_1_33221 5.0kb upstream 5.0kb upstream 8150   true Lsat_1_v8_lg_1: 33638419-33646568 Lactuca sativa
Lsat_1_v5_gn_1_33221 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 33638419-33643418 Lactuca sativa
Lsat_1_v5_gn_1_33221 5.0kb downstream 5.0kb downstream 8150   true Lsat_1_v8_lg_1: 33643419-33651568 Lactuca sativa
Lsat_1_v5_gn_1_33221 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 33646569-33651568 Lactuca sativa
Lsat_1_v5_gn_1_33221 10.0kb upstream 10.0kb upstream 13150   true Lsat_1_v8_lg_1: 33633419-33646568 Lactuca sativa
Lsat_1_v5_gn_1_33221 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 33633419-33643418 Lactuca sativa
Lsat_1_v5_gn_1_33221 10.0kb downstream 10.0kb downstream 13150   true Lsat_1_v8_lg_1: 33643419-33656568 Lactuca sativa
Lsat_1_v5_gn_1_33221 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 33646569-33656568 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471181 5263 Asterids View MSA
123738908 5271 Pentapetalae View MSA
122785764 5272 Eudicot View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain