Gene : Lsat_1_v5_gn_1_49860 L. sativa V8
Defline:  (1 of 2) PTHR11266//PTHR11266:SF35 - PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MOB24 Genomic Order:  1621
Name:  ? Lsat_1_v5_gn_1_49860 Secondary Identifier:  ? PAC:38945143
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_49860 0.5kb upstream 0.5kb upstream 2063   true Lsat_1_v8_lg_1: 55619913-55621975 Lactuca sativa
Lsat_1_v5_gn_1_49860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 55621476-55621975 Lactuca sativa
Lsat_1_v5_gn_1_49860 0.5kb downstream 0.5kb downstream 2063   true Lsat_1_v8_lg_1: 55619413-55621475 Lactuca sativa
Lsat_1_v5_gn_1_49860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 55619413-55619912 Lactuca sativa
Lsat_1_v5_gn_1_49860 1.0kb upstream 1.0kb upstream 2563   true Lsat_1_v8_lg_1: 55619913-55622475 Lactuca sativa
Lsat_1_v5_gn_1_49860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 55621476-55622475 Lactuca sativa
Lsat_1_v5_gn_1_49860 1.0kb downstream 1.0kb downstream 2563   true Lsat_1_v8_lg_1: 55618913-55621475 Lactuca sativa
Lsat_1_v5_gn_1_49860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 55618913-55619912 Lactuca sativa
Lsat_1_v5_gn_1_49860 2.0kb upstream 2.0kb upstream 3563   true Lsat_1_v8_lg_1: 55619913-55623475 Lactuca sativa
Lsat_1_v5_gn_1_49860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 55621476-55623475 Lactuca sativa
Lsat_1_v5_gn_1_49860 2.0kb downstream 2.0kb downstream 3563   true Lsat_1_v8_lg_1: 55617913-55621475 Lactuca sativa
Lsat_1_v5_gn_1_49860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 55617913-55619912 Lactuca sativa
Lsat_1_v5_gn_1_49860 5.0kb upstream 5.0kb upstream 6563   true Lsat_1_v8_lg_1: 55619913-55626475 Lactuca sativa
Lsat_1_v5_gn_1_49860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 55621476-55626475 Lactuca sativa
Lsat_1_v5_gn_1_49860 5.0kb downstream 5.0kb downstream 6563   true Lsat_1_v8_lg_1: 55614913-55621475 Lactuca sativa
Lsat_1_v5_gn_1_49860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 55614913-55619912 Lactuca sativa
Lsat_1_v5_gn_1_49860 10.0kb upstream 10.0kb upstream 11563   true Lsat_1_v8_lg_1: 55619913-55631475 Lactuca sativa
Lsat_1_v5_gn_1_49860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 55621476-55631475 Lactuca sativa
Lsat_1_v5_gn_1_49860 10.0kb downstream 10.0kb downstream 11563   true Lsat_1_v8_lg_1: 55609913-55621475 Lactuca sativa
Lsat_1_v5_gn_1_49860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 55609913-55619912 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469100 5263 Asterids View MSA
123749582 5271 Pentapetalae View MSA
122788568 5272 Eudicot View MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain