Gene : Lsat_1_v5_gn_1_51960 L. sativa V8
Defline:  (1 of 10) PTHR27001//PTHR27001:SF29 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN-RELATED Genomic Order:  1760
Name:  ? Lsat_1_v5_gn_1_51960 Secondary Identifier:  ? PAC:38944076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_51960 0.5kb upstream 0.5kb upstream 3461   true Lsat_1_v8_lg_1: 61477057-61480517 Lactuca sativa
Lsat_1_v5_gn_1_51960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 61480018-61480517 Lactuca sativa
Lsat_1_v5_gn_1_51960 0.5kb downstream 0.5kb downstream 3461   true Lsat_1_v8_lg_1: 61476557-61480017 Lactuca sativa
Lsat_1_v5_gn_1_51960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 61476557-61477056 Lactuca sativa
Lsat_1_v5_gn_1_51960 1.0kb upstream 1.0kb upstream 3961   true Lsat_1_v8_lg_1: 61477057-61481017 Lactuca sativa
Lsat_1_v5_gn_1_51960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 61480018-61481017 Lactuca sativa
Lsat_1_v5_gn_1_51960 1.0kb downstream 1.0kb downstream 3961   true Lsat_1_v8_lg_1: 61476057-61480017 Lactuca sativa
Lsat_1_v5_gn_1_51960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 61476057-61477056 Lactuca sativa
Lsat_1_v5_gn_1_51960 2.0kb upstream 2.0kb upstream 4961   true Lsat_1_v8_lg_1: 61477057-61482017 Lactuca sativa
Lsat_1_v5_gn_1_51960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 61480018-61482017 Lactuca sativa
Lsat_1_v5_gn_1_51960 2.0kb downstream 2.0kb downstream 4961   true Lsat_1_v8_lg_1: 61475057-61480017 Lactuca sativa
Lsat_1_v5_gn_1_51960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 61475057-61477056 Lactuca sativa
Lsat_1_v5_gn_1_51960 5.0kb upstream 5.0kb upstream 7961   true Lsat_1_v8_lg_1: 61477057-61485017 Lactuca sativa
Lsat_1_v5_gn_1_51960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 61480018-61485017 Lactuca sativa
Lsat_1_v5_gn_1_51960 5.0kb downstream 5.0kb downstream 7961   true Lsat_1_v8_lg_1: 61472057-61480017 Lactuca sativa
Lsat_1_v5_gn_1_51960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 61472057-61477056 Lactuca sativa
Lsat_1_v5_gn_1_51960 10.0kb upstream 10.0kb upstream 12961   true Lsat_1_v8_lg_1: 61477057-61490017 Lactuca sativa
Lsat_1_v5_gn_1_51960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 61480018-61490017 Lactuca sativa
Lsat_1_v5_gn_1_51960 10.0kb downstream 10.0kb downstream 12961   true Lsat_1_v8_lg_1: 61467057-61480017 Lactuca sativa
Lsat_1_v5_gn_1_51960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 61467057-61477056 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481562 5263 Asterids View MSA
123752129 5271 Pentapetalae View MSA
122792935 5272 Eudicot View MSA
122046245 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350468 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain