Gene : Lsat_1_v5_gn_1_52460 L. sativa V8
Defline:  (1 of 1) K12826 - splicing factor 3A subunit 2 (SF3A2, SAP62) Genomic Order:  1721
Name:  ? Lsat_1_v5_gn_1_52460 Secondary Identifier:  ? PAC:38942972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_52460 0.5kb upstream 0.5kb upstream 2573   true Lsat_1_v8_lg_1: 60011407-60013979 Lactuca sativa
Lsat_1_v5_gn_1_52460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 60013480-60013979 Lactuca sativa
Lsat_1_v5_gn_1_52460 0.5kb downstream 0.5kb downstream 2573   true Lsat_1_v8_lg_1: 60010907-60013479 Lactuca sativa
Lsat_1_v5_gn_1_52460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 60010907-60011406 Lactuca sativa
Lsat_1_v5_gn_1_52460 1.0kb upstream 1.0kb upstream 3073   true Lsat_1_v8_lg_1: 60011407-60014479 Lactuca sativa
Lsat_1_v5_gn_1_52460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 60013480-60014479 Lactuca sativa
Lsat_1_v5_gn_1_52460 1.0kb downstream 1.0kb downstream 3073   true Lsat_1_v8_lg_1: 60010407-60013479 Lactuca sativa
Lsat_1_v5_gn_1_52460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 60010407-60011406 Lactuca sativa
Lsat_1_v5_gn_1_52460 2.0kb upstream 2.0kb upstream 4073   true Lsat_1_v8_lg_1: 60011407-60015479 Lactuca sativa
Lsat_1_v5_gn_1_52460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 60013480-60015479 Lactuca sativa
Lsat_1_v5_gn_1_52460 2.0kb downstream 2.0kb downstream 4073   true Lsat_1_v8_lg_1: 60009407-60013479 Lactuca sativa
Lsat_1_v5_gn_1_52460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 60009407-60011406 Lactuca sativa
Lsat_1_v5_gn_1_52460 5.0kb upstream 5.0kb upstream 7073   true Lsat_1_v8_lg_1: 60011407-60018479 Lactuca sativa
Lsat_1_v5_gn_1_52460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 60013480-60018479 Lactuca sativa
Lsat_1_v5_gn_1_52460 5.0kb downstream 5.0kb downstream 7073   true Lsat_1_v8_lg_1: 60006407-60013479 Lactuca sativa
Lsat_1_v5_gn_1_52460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 60006407-60011406 Lactuca sativa
Lsat_1_v5_gn_1_52460 10.0kb upstream 10.0kb upstream 12073   true Lsat_1_v8_lg_1: 60011407-60023479 Lactuca sativa
Lsat_1_v5_gn_1_52460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 60013480-60023479 Lactuca sativa
Lsat_1_v5_gn_1_52460 10.0kb downstream 10.0kb downstream 12073   true Lsat_1_v8_lg_1: 60001407-60013479 Lactuca sativa
Lsat_1_v5_gn_1_52460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 60001407-60011406 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471125 5263 Asterids View MSA
123745899 5271 Pentapetalae View MSA
122793816 5272 Eudicot View MSA
122043873 5273 Angiosperm View MSA
121344235 5274 Embryophyte View MSA
123425065 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain