Gene : Lsat_1_v5_gn_1_5280 L. sativa V8
Defline:  (1 of 1) PTHR13017:SF0 - METHENYLTETRAHYDROFOLATE SYNTHASE DOMAIN-CONTAINING PROTEIN Genomic Order:  148
Name:  ? Lsat_1_v5_gn_1_5280 Secondary Identifier:  ? PAC:38947262
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_5280 0.5kb upstream 0.5kb upstream 4123   true Lsat_1_v8_lg_1: 6069272-6073394 Lactuca sativa
Lsat_1_v5_gn_1_5280 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 6072895-6073394 Lactuca sativa
Lsat_1_v5_gn_1_5280 0.5kb downstream 0.5kb downstream 4123   true Lsat_1_v8_lg_1: 6068772-6072894 Lactuca sativa
Lsat_1_v5_gn_1_5280 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 6068772-6069271 Lactuca sativa
Lsat_1_v5_gn_1_5280 1.0kb upstream 1.0kb upstream 4623   true Lsat_1_v8_lg_1: 6069272-6073894 Lactuca sativa
Lsat_1_v5_gn_1_5280 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 6072895-6073894 Lactuca sativa
Lsat_1_v5_gn_1_5280 1.0kb downstream 1.0kb downstream 4623   true Lsat_1_v8_lg_1: 6068272-6072894 Lactuca sativa
Lsat_1_v5_gn_1_5280 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 6068272-6069271 Lactuca sativa
Lsat_1_v5_gn_1_5280 2.0kb upstream 2.0kb upstream 5623   true Lsat_1_v8_lg_1: 6069272-6074894 Lactuca sativa
Lsat_1_v5_gn_1_5280 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 6072895-6074894 Lactuca sativa
Lsat_1_v5_gn_1_5280 2.0kb downstream 2.0kb downstream 5623   true Lsat_1_v8_lg_1: 6067272-6072894 Lactuca sativa
Lsat_1_v5_gn_1_5280 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 6067272-6069271 Lactuca sativa
Lsat_1_v5_gn_1_5280 5.0kb upstream 5.0kb upstream 8623   true Lsat_1_v8_lg_1: 6069272-6077894 Lactuca sativa
Lsat_1_v5_gn_1_5280 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 6072895-6077894 Lactuca sativa
Lsat_1_v5_gn_1_5280 5.0kb downstream 5.0kb downstream 8623   true Lsat_1_v8_lg_1: 6064272-6072894 Lactuca sativa
Lsat_1_v5_gn_1_5280 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 6064272-6069271 Lactuca sativa
Lsat_1_v5_gn_1_5280 10.0kb upstream 10.0kb upstream 13623   true Lsat_1_v8_lg_1: 6069272-6082894 Lactuca sativa
Lsat_1_v5_gn_1_5280 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 6072895-6082894 Lactuca sativa
Lsat_1_v5_gn_1_5280 10.0kb downstream 10.0kb downstream 13623   true Lsat_1_v8_lg_1: 6059272-6072894 Lactuca sativa
Lsat_1_v5_gn_1_5280 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 6059272-6069271 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474447 5263 Asterids View MSA
123740558 5271 Pentapetalae View MSA
122791388 5272 Eudicot View MSA
122041848 5273 Angiosperm View MSA
121347845 5274 Embryophyte View MSA
123425281 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain