Gene : Lsat_1_v5_gn_1_53480 L. sativa V8
Genomic Order:  1816 Name:  ? Lsat_1_v5_gn_1_53480
Secondary Identifier:  ? PAC:38944288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_53480 0.5kb upstream 0.5kb upstream 2986   true Lsat_1_v8_lg_1: 63927436-63930421 Lactuca sativa
Lsat_1_v5_gn_1_53480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 63927436-63927935 Lactuca sativa
Lsat_1_v5_gn_1_53480 0.5kb downstream 0.5kb downstream 2986   true Lsat_1_v8_lg_1: 63927936-63930921 Lactuca sativa
Lsat_1_v5_gn_1_53480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 63930422-63930921 Lactuca sativa
Lsat_1_v5_gn_1_53480 1.0kb upstream 1.0kb upstream 3486   true Lsat_1_v8_lg_1: 63926936-63930421 Lactuca sativa
Lsat_1_v5_gn_1_53480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 63926936-63927935 Lactuca sativa
Lsat_1_v5_gn_1_53480 1.0kb downstream 1.0kb downstream 3486   true Lsat_1_v8_lg_1: 63927936-63931421 Lactuca sativa
Lsat_1_v5_gn_1_53480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 63930422-63931421 Lactuca sativa
Lsat_1_v5_gn_1_53480 2.0kb upstream 2.0kb upstream 4486   true Lsat_1_v8_lg_1: 63925936-63930421 Lactuca sativa
Lsat_1_v5_gn_1_53480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 63925936-63927935 Lactuca sativa
Lsat_1_v5_gn_1_53480 2.0kb downstream 2.0kb downstream 4486   true Lsat_1_v8_lg_1: 63927936-63932421 Lactuca sativa
Lsat_1_v5_gn_1_53480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 63930422-63932421 Lactuca sativa
Lsat_1_v5_gn_1_53480 5.0kb upstream 5.0kb upstream 7486   true Lsat_1_v8_lg_1: 63922936-63930421 Lactuca sativa
Lsat_1_v5_gn_1_53480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 63922936-63927935 Lactuca sativa
Lsat_1_v5_gn_1_53480 5.0kb downstream 5.0kb downstream 7486   true Lsat_1_v8_lg_1: 63927936-63935421 Lactuca sativa
Lsat_1_v5_gn_1_53480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 63930422-63935421 Lactuca sativa
Lsat_1_v5_gn_1_53480 10.0kb upstream 10.0kb upstream 12486   true Lsat_1_v8_lg_1: 63917936-63930421 Lactuca sativa
Lsat_1_v5_gn_1_53480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 63917936-63927935 Lactuca sativa
Lsat_1_v5_gn_1_53480 10.0kb downstream 10.0kb downstream 12486   true Lsat_1_v8_lg_1: 63927936-63940421 Lactuca sativa
Lsat_1_v5_gn_1_53480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 63930422-63940421 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041519 5273 Angiosperm View MSA
121470436 5263 Asterids View MSA
123738525 5271 Pentapetalae View MSA
122788017 5272 Eudicot View MSA
121351305 5274 Embryophyte View MSA
123426139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain