Gene : Lsat_1_v5_gn_1_53521 L. sativa V8
Defline:  (1 of 2) PTHR30238:SF0 - PROTEIN PIGMENT DEFECTIVE 149 Genomic Order:  1818
Name:  ? Lsat_1_v5_gn_1_53521 Secondary Identifier:  ? PAC:38944297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_53521 0.5kb upstream 0.5kb upstream 3598   true Lsat_1_v8_lg_1: 63935334-63938931 Lactuca sativa
Lsat_1_v5_gn_1_53521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 63938432-63938931 Lactuca sativa
Lsat_1_v5_gn_1_53521 0.5kb downstream 0.5kb downstream 3598   true Lsat_1_v8_lg_1: 63934834-63938431 Lactuca sativa
Lsat_1_v5_gn_1_53521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 63934834-63935333 Lactuca sativa
Lsat_1_v5_gn_1_53521 1.0kb upstream 1.0kb upstream 4098   true Lsat_1_v8_lg_1: 63935334-63939431 Lactuca sativa
Lsat_1_v5_gn_1_53521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 63938432-63939431 Lactuca sativa
Lsat_1_v5_gn_1_53521 1.0kb downstream 1.0kb downstream 4098   true Lsat_1_v8_lg_1: 63934334-63938431 Lactuca sativa
Lsat_1_v5_gn_1_53521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 63934334-63935333 Lactuca sativa
Lsat_1_v5_gn_1_53521 2.0kb upstream 2.0kb upstream 5098   true Lsat_1_v8_lg_1: 63935334-63940431 Lactuca sativa
Lsat_1_v5_gn_1_53521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 63938432-63940431 Lactuca sativa
Lsat_1_v5_gn_1_53521 2.0kb downstream 2.0kb downstream 5098   true Lsat_1_v8_lg_1: 63933334-63938431 Lactuca sativa
Lsat_1_v5_gn_1_53521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 63933334-63935333 Lactuca sativa
Lsat_1_v5_gn_1_53521 5.0kb upstream 5.0kb upstream 8098   true Lsat_1_v8_lg_1: 63935334-63943431 Lactuca sativa
Lsat_1_v5_gn_1_53521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 63938432-63943431 Lactuca sativa
Lsat_1_v5_gn_1_53521 5.0kb downstream 5.0kb downstream 8098   true Lsat_1_v8_lg_1: 63930334-63938431 Lactuca sativa
Lsat_1_v5_gn_1_53521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 63930334-63935333 Lactuca sativa
Lsat_1_v5_gn_1_53521 10.0kb upstream 10.0kb upstream 13098   true Lsat_1_v8_lg_1: 63935334-63948431 Lactuca sativa
Lsat_1_v5_gn_1_53521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 63938432-63948431 Lactuca sativa
Lsat_1_v5_gn_1_53521 10.0kb downstream 10.0kb downstream 13098   true Lsat_1_v8_lg_1: 63925334-63938431 Lactuca sativa
Lsat_1_v5_gn_1_53521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 63925334-63935333 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026321 5273 Angiosperm View MSA
121472410 5263 Asterids View MSA
123748654 5271 Pentapetalae View MSA
122791010 5272 Eudicot View MSA
121349426 5274 Embryophyte View MSA
123424964 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain