Gene : Lsat_1_v5_gn_1_5420 L. sativa V8
Defline:  (1 of 1) K14407 - cleavage stimulation factor subunit 2 (CSTF2, RNA15) Genomic Order:  164
Name:  ? Lsat_1_v5_gn_1_5420 Secondary Identifier:  ? PAC:38943379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_5420 0.5kb upstream 0.5kb upstream 4212   true Lsat_1_v8_lg_1: 6377478-6381689 Lactuca sativa
Lsat_1_v5_gn_1_5420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 6377478-6377977 Lactuca sativa
Lsat_1_v5_gn_1_5420 0.5kb downstream 0.5kb downstream 4212   true Lsat_1_v8_lg_1: 6377978-6382189 Lactuca sativa
Lsat_1_v5_gn_1_5420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 6381690-6382189 Lactuca sativa
Lsat_1_v5_gn_1_5420 1.0kb upstream 1.0kb upstream 4712   true Lsat_1_v8_lg_1: 6376978-6381689 Lactuca sativa
Lsat_1_v5_gn_1_5420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 6376978-6377977 Lactuca sativa
Lsat_1_v5_gn_1_5420 1.0kb downstream 1.0kb downstream 4712   true Lsat_1_v8_lg_1: 6377978-6382689 Lactuca sativa
Lsat_1_v5_gn_1_5420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 6381690-6382689 Lactuca sativa
Lsat_1_v5_gn_1_5420 2.0kb upstream 2.0kb upstream 5712   true Lsat_1_v8_lg_1: 6375978-6381689 Lactuca sativa
Lsat_1_v5_gn_1_5420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 6375978-6377977 Lactuca sativa
Lsat_1_v5_gn_1_5420 2.0kb downstream 2.0kb downstream 5712   true Lsat_1_v8_lg_1: 6377978-6383689 Lactuca sativa
Lsat_1_v5_gn_1_5420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 6381690-6383689 Lactuca sativa
Lsat_1_v5_gn_1_5420 5.0kb upstream 5.0kb upstream 8712   true Lsat_1_v8_lg_1: 6372978-6381689 Lactuca sativa
Lsat_1_v5_gn_1_5420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 6372978-6377977 Lactuca sativa
Lsat_1_v5_gn_1_5420 5.0kb downstream 5.0kb downstream 8712   true Lsat_1_v8_lg_1: 6377978-6386689 Lactuca sativa
Lsat_1_v5_gn_1_5420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 6381690-6386689 Lactuca sativa
Lsat_1_v5_gn_1_5420 10.0kb upstream 10.0kb upstream 13712   true Lsat_1_v8_lg_1: 6367978-6381689 Lactuca sativa
Lsat_1_v5_gn_1_5420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 6367978-6377977 Lactuca sativa
Lsat_1_v5_gn_1_5420 10.0kb downstream 10.0kb downstream 13712   true Lsat_1_v8_lg_1: 6377978-6391689 Lactuca sativa
Lsat_1_v5_gn_1_5420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 6381690-6391689 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041194 5273 Angiosperm View MSA
121471296 5263 Asterids View MSA
123738960 5271 Pentapetalae View MSA
122787206 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121344917 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain