Gene : Lsat_1_v5_gn_1_54260 L. sativa V8
Defline:  (1 of 1) K11984 - U4/U6.U5 tri-snRNP-associated protein 1 (SART1, HAF, SNU66) Genomic Order:  1786
Name:  ? Lsat_1_v5_gn_1_54260 Secondary Identifier:  ? PAC:38947549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_54260 0.5kb upstream 0.5kb upstream 4786   true Lsat_1_v8_lg_1: 63180932-63185717 Lactuca sativa
Lsat_1_v5_gn_1_54260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 63185218-63185717 Lactuca sativa
Lsat_1_v5_gn_1_54260 0.5kb downstream 0.5kb downstream 4786   true Lsat_1_v8_lg_1: 63180432-63185217 Lactuca sativa
Lsat_1_v5_gn_1_54260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 63180432-63180931 Lactuca sativa
Lsat_1_v5_gn_1_54260 1.0kb upstream 1.0kb upstream 5286   true Lsat_1_v8_lg_1: 63180932-63186217 Lactuca sativa
Lsat_1_v5_gn_1_54260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 63185218-63186217 Lactuca sativa
Lsat_1_v5_gn_1_54260 1.0kb downstream 1.0kb downstream 5286   true Lsat_1_v8_lg_1: 63179932-63185217 Lactuca sativa
Lsat_1_v5_gn_1_54260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 63179932-63180931 Lactuca sativa
Lsat_1_v5_gn_1_54260 2.0kb upstream 2.0kb upstream 6286   true Lsat_1_v8_lg_1: 63180932-63187217 Lactuca sativa
Lsat_1_v5_gn_1_54260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 63185218-63187217 Lactuca sativa
Lsat_1_v5_gn_1_54260 2.0kb downstream 2.0kb downstream 6286   true Lsat_1_v8_lg_1: 63178932-63185217 Lactuca sativa
Lsat_1_v5_gn_1_54260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 63178932-63180931 Lactuca sativa
Lsat_1_v5_gn_1_54260 5.0kb upstream 5.0kb upstream 9286   true Lsat_1_v8_lg_1: 63180932-63190217 Lactuca sativa
Lsat_1_v5_gn_1_54260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 63185218-63190217 Lactuca sativa
Lsat_1_v5_gn_1_54260 5.0kb downstream 5.0kb downstream 9286   true Lsat_1_v8_lg_1: 63175932-63185217 Lactuca sativa
Lsat_1_v5_gn_1_54260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 63175932-63180931 Lactuca sativa
Lsat_1_v5_gn_1_54260 10.0kb upstream 10.0kb upstream 14286   true Lsat_1_v8_lg_1: 63180932-63195217 Lactuca sativa
Lsat_1_v5_gn_1_54260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 63185218-63195217 Lactuca sativa
Lsat_1_v5_gn_1_54260 10.0kb downstream 10.0kb downstream 14286   true Lsat_1_v8_lg_1: 63170932-63185217 Lactuca sativa
Lsat_1_v5_gn_1_54260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 63170932-63180931 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470418 5263 Asterids View MSA
123746922 5271 Pentapetalae View MSA
122786640 5272 Eudicot View MSA
122041665 5273 Angiosperm View MSA
121345433 5274 Embryophyte View MSA
123424851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain