Gene : Lsat_1_v5_gn_1_55881 L. sativa V8
Defline:  (1 of 28) PF16135 - TPL-binding domain in jasmonate signalling (Jas) Genomic Order:  1835
Name:  ? Lsat_1_v5_gn_1_55881 Secondary Identifier:  ? PAC:38944510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_55881 0.5kb upstream 0.5kb upstream 7562   true Lsat_1_v8_lg_1: 64762124-64769685 Lactuca sativa
Lsat_1_v5_gn_1_55881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 64762124-64762623 Lactuca sativa
Lsat_1_v5_gn_1_55881 0.5kb downstream 0.5kb downstream 7562   true Lsat_1_v8_lg_1: 64762624-64770185 Lactuca sativa
Lsat_1_v5_gn_1_55881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 64769686-64770185 Lactuca sativa
Lsat_1_v5_gn_1_55881 1.0kb upstream 1.0kb upstream 8062   true Lsat_1_v8_lg_1: 64761624-64769685 Lactuca sativa
Lsat_1_v5_gn_1_55881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 64761624-64762623 Lactuca sativa
Lsat_1_v5_gn_1_55881 1.0kb downstream 1.0kb downstream 8062   true Lsat_1_v8_lg_1: 64762624-64770685 Lactuca sativa
Lsat_1_v5_gn_1_55881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 64769686-64770685 Lactuca sativa
Lsat_1_v5_gn_1_55881 2.0kb upstream 2.0kb upstream 9062   true Lsat_1_v8_lg_1: 64760624-64769685 Lactuca sativa
Lsat_1_v5_gn_1_55881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 64760624-64762623 Lactuca sativa
Lsat_1_v5_gn_1_55881 2.0kb downstream 2.0kb downstream 9062   true Lsat_1_v8_lg_1: 64762624-64771685 Lactuca sativa
Lsat_1_v5_gn_1_55881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 64769686-64771685 Lactuca sativa
Lsat_1_v5_gn_1_55881 5.0kb upstream 5.0kb upstream 12062   true Lsat_1_v8_lg_1: 64757624-64769685 Lactuca sativa
Lsat_1_v5_gn_1_55881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 64757624-64762623 Lactuca sativa
Lsat_1_v5_gn_1_55881 5.0kb downstream 5.0kb downstream 12062   true Lsat_1_v8_lg_1: 64762624-64774685 Lactuca sativa
Lsat_1_v5_gn_1_55881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 64769686-64774685 Lactuca sativa
Lsat_1_v5_gn_1_55881 10.0kb upstream 10.0kb upstream 17062   true Lsat_1_v8_lg_1: 64752624-64769685 Lactuca sativa
Lsat_1_v5_gn_1_55881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 64752624-64762623 Lactuca sativa
Lsat_1_v5_gn_1_55881 10.0kb downstream 10.0kb downstream 17062   true Lsat_1_v8_lg_1: 64762624-64779685 Lactuca sativa
Lsat_1_v5_gn_1_55881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 64769686-64779685 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478581 5263 Asterids View MSA
123747463 5271 Pentapetalae View MSA
122794643 5272 Eudicot View MSA
122051104 5273 Angiosperm View MSA
121312296 5274 Embryophyte View MSA
123349483 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain