Gene : Lsat_1_v5_gn_1_41100 L. sativa V8
Defline:  (1 of 1) K12121 - phytochrome B (PHYB) Genomic Order:  1410
Name:  ? Lsat_1_v5_gn_1_41100 Secondary Identifier:  ? PAC:38947176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_41100 0.5kb upstream 0.5kb upstream 5094   true Lsat_1_v8_lg_1: 47653560-47658653 Lactuca sativa
Lsat_1_v5_gn_1_41100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 47658154-47658653 Lactuca sativa
Lsat_1_v5_gn_1_41100 0.5kb downstream 0.5kb downstream 5094   true Lsat_1_v8_lg_1: 47653060-47658153 Lactuca sativa
Lsat_1_v5_gn_1_41100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 47653060-47653559 Lactuca sativa
Lsat_1_v5_gn_1_41100 1.0kb upstream 1.0kb upstream 5594   true Lsat_1_v8_lg_1: 47653560-47659153 Lactuca sativa
Lsat_1_v5_gn_1_41100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 47658154-47659153 Lactuca sativa
Lsat_1_v5_gn_1_41100 1.0kb downstream 1.0kb downstream 5594   true Lsat_1_v8_lg_1: 47652560-47658153 Lactuca sativa
Lsat_1_v5_gn_1_41100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 47652560-47653559 Lactuca sativa
Lsat_1_v5_gn_1_41100 2.0kb upstream 2.0kb upstream 6594   true Lsat_1_v8_lg_1: 47653560-47660153 Lactuca sativa
Lsat_1_v5_gn_1_41100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 47658154-47660153 Lactuca sativa
Lsat_1_v5_gn_1_41100 2.0kb downstream 2.0kb downstream 6594   true Lsat_1_v8_lg_1: 47651560-47658153 Lactuca sativa
Lsat_1_v5_gn_1_41100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 47651560-47653559 Lactuca sativa
Lsat_1_v5_gn_1_41100 5.0kb upstream 5.0kb upstream 9594   true Lsat_1_v8_lg_1: 47653560-47663153 Lactuca sativa
Lsat_1_v5_gn_1_41100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 47658154-47663153 Lactuca sativa
Lsat_1_v5_gn_1_41100 5.0kb downstream 5.0kb downstream 9594   true Lsat_1_v8_lg_1: 47648560-47658153 Lactuca sativa
Lsat_1_v5_gn_1_41100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 47648560-47653559 Lactuca sativa
Lsat_1_v5_gn_1_41100 10.0kb upstream 10.0kb upstream 14594   true Lsat_1_v8_lg_1: 47653560-47668153 Lactuca sativa
Lsat_1_v5_gn_1_41100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 47658154-47668153 Lactuca sativa
Lsat_1_v5_gn_1_41100 10.0kb downstream 10.0kb downstream 14594   true Lsat_1_v8_lg_1: 47643560-47658153 Lactuca sativa
Lsat_1_v5_gn_1_41100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 47643560-47653559 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468429 5263 Asterids View MSA
123737518 5271 Pentapetalae View MSA
122797861 5272 Eudicot View MSA
122046644 5273 Angiosperm View MSA
121350342 5274 Embryophyte View MSA
123381687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain