Gene : Lsat_1_v5_gn_1_42021 L. sativa V8
Defline:  (1 of 1) PTHR12121//PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Genomic Order:  1428
Name:  ? Lsat_1_v5_gn_1_42021 Secondary Identifier:  ? PAC:38945106
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_42021 0.5kb upstream 0.5kb upstream 4363   true Lsat_1_v8_lg_1: 48037143-48041505 Lactuca sativa
Lsat_1_v5_gn_1_42021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 48037143-48037642 Lactuca sativa
Lsat_1_v5_gn_1_42021 0.5kb downstream 0.5kb downstream 4363   true Lsat_1_v8_lg_1: 48037643-48042005 Lactuca sativa
Lsat_1_v5_gn_1_42021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 48041506-48042005 Lactuca sativa
Lsat_1_v5_gn_1_42021 1.0kb upstream 1.0kb upstream 4863   true Lsat_1_v8_lg_1: 48036643-48041505 Lactuca sativa
Lsat_1_v5_gn_1_42021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 48036643-48037642 Lactuca sativa
Lsat_1_v5_gn_1_42021 1.0kb downstream 1.0kb downstream 4863   true Lsat_1_v8_lg_1: 48037643-48042505 Lactuca sativa
Lsat_1_v5_gn_1_42021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 48041506-48042505 Lactuca sativa
Lsat_1_v5_gn_1_42021 2.0kb upstream 2.0kb upstream 5863   true Lsat_1_v8_lg_1: 48035643-48041505 Lactuca sativa
Lsat_1_v5_gn_1_42021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 48035643-48037642 Lactuca sativa
Lsat_1_v5_gn_1_42021 2.0kb downstream 2.0kb downstream 5863   true Lsat_1_v8_lg_1: 48037643-48043505 Lactuca sativa
Lsat_1_v5_gn_1_42021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 48041506-48043505 Lactuca sativa
Lsat_1_v5_gn_1_42021 5.0kb upstream 5.0kb upstream 8863   true Lsat_1_v8_lg_1: 48032643-48041505 Lactuca sativa
Lsat_1_v5_gn_1_42021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 48032643-48037642 Lactuca sativa
Lsat_1_v5_gn_1_42021 5.0kb downstream 5.0kb downstream 8863   true Lsat_1_v8_lg_1: 48037643-48046505 Lactuca sativa
Lsat_1_v5_gn_1_42021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 48041506-48046505 Lactuca sativa
Lsat_1_v5_gn_1_42021 10.0kb upstream 10.0kb upstream 13863   true Lsat_1_v8_lg_1: 48027643-48041505 Lactuca sativa
Lsat_1_v5_gn_1_42021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 48027643-48037642 Lactuca sativa
Lsat_1_v5_gn_1_42021 10.0kb downstream 10.0kb downstream 13863   true Lsat_1_v8_lg_1: 48037643-48051505 Lactuca sativa
Lsat_1_v5_gn_1_42021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 48041506-48051505 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468709 5263 Asterids View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain