Gene : Lsat_1_v5_gn_1_43420 L. sativa V8
Defline:  (1 of 19) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  1506
Name:  ? Lsat_1_v5_gn_1_43420 Secondary Identifier:  ? PAC:38947270
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_43420 0.5kb upstream 0.5kb upstream 2628   true Lsat_1_v8_lg_1: 50636040-50638667 Lactuca sativa
Lsat_1_v5_gn_1_43420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 50638168-50638667 Lactuca sativa
Lsat_1_v5_gn_1_43420 0.5kb downstream 0.5kb downstream 2628   true Lsat_1_v8_lg_1: 50635540-50638167 Lactuca sativa
Lsat_1_v5_gn_1_43420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 50635540-50636039 Lactuca sativa
Lsat_1_v5_gn_1_43420 1.0kb upstream 1.0kb upstream 3128   true Lsat_1_v8_lg_1: 50636040-50639167 Lactuca sativa
Lsat_1_v5_gn_1_43420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 50638168-50639167 Lactuca sativa
Lsat_1_v5_gn_1_43420 1.0kb downstream 1.0kb downstream 3128   true Lsat_1_v8_lg_1: 50635040-50638167 Lactuca sativa
Lsat_1_v5_gn_1_43420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 50635040-50636039 Lactuca sativa
Lsat_1_v5_gn_1_43420 2.0kb upstream 2.0kb upstream 4128   true Lsat_1_v8_lg_1: 50636040-50640167 Lactuca sativa
Lsat_1_v5_gn_1_43420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 50638168-50640167 Lactuca sativa
Lsat_1_v5_gn_1_43420 2.0kb downstream 2.0kb downstream 4128   true Lsat_1_v8_lg_1: 50634040-50638167 Lactuca sativa
Lsat_1_v5_gn_1_43420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 50634040-50636039 Lactuca sativa
Lsat_1_v5_gn_1_43420 5.0kb upstream 5.0kb upstream 7128   true Lsat_1_v8_lg_1: 50636040-50643167 Lactuca sativa
Lsat_1_v5_gn_1_43420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 50638168-50643167 Lactuca sativa
Lsat_1_v5_gn_1_43420 5.0kb downstream 5.0kb downstream 7128   true Lsat_1_v8_lg_1: 50631040-50638167 Lactuca sativa
Lsat_1_v5_gn_1_43420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 50631040-50636039 Lactuca sativa
Lsat_1_v5_gn_1_43420 10.0kb upstream 10.0kb upstream 12128   true Lsat_1_v8_lg_1: 50636040-50648167 Lactuca sativa
Lsat_1_v5_gn_1_43420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 50638168-50648167 Lactuca sativa
Lsat_1_v5_gn_1_43420 10.0kb downstream 10.0kb downstream 12128   true Lsat_1_v8_lg_1: 50626040-50638167 Lactuca sativa
Lsat_1_v5_gn_1_43420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 50626040-50636039 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027331 5273 Angiosperm View MSA
121473966 5263 Asterids View MSA
123741524 5271 Pentapetalae View MSA
122770072 5272 Eudicot View MSA
121296997 5274 Embryophyte View MSA
123335098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain