Gene : Lsat_1_v5_gn_1_44140 L. sativa V8
Defline:  (1 of 3) PTHR23316//PTHR23316:SF22 - IMPORTIN ALPHA // ARMADILLO/BETA-CATENIN-LIKE REPEATS-CONTAINING PROTEIN-RELATED Genomic Order:  1476
Name:  ? Lsat_1_v5_gn_1_44140 Secondary Identifier:  ? PAC:38944474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_44140 0.5kb upstream 0.5kb upstream 4041   true Lsat_1_v8_lg_1: 49636066-49640106 Lactuca sativa
Lsat_1_v5_gn_1_44140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 49636066-49636565 Lactuca sativa
Lsat_1_v5_gn_1_44140 0.5kb downstream 0.5kb downstream 4041   true Lsat_1_v8_lg_1: 49636566-49640606 Lactuca sativa
Lsat_1_v5_gn_1_44140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 49640107-49640606 Lactuca sativa
Lsat_1_v5_gn_1_44140 1.0kb upstream 1.0kb upstream 4541   true Lsat_1_v8_lg_1: 49635566-49640106 Lactuca sativa
Lsat_1_v5_gn_1_44140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 49635566-49636565 Lactuca sativa
Lsat_1_v5_gn_1_44140 1.0kb downstream 1.0kb downstream 4541   true Lsat_1_v8_lg_1: 49636566-49641106 Lactuca sativa
Lsat_1_v5_gn_1_44140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 49640107-49641106 Lactuca sativa
Lsat_1_v5_gn_1_44140 2.0kb upstream 2.0kb upstream 5541   true Lsat_1_v8_lg_1: 49634566-49640106 Lactuca sativa
Lsat_1_v5_gn_1_44140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 49634566-49636565 Lactuca sativa
Lsat_1_v5_gn_1_44140 2.0kb downstream 2.0kb downstream 5541   true Lsat_1_v8_lg_1: 49636566-49642106 Lactuca sativa
Lsat_1_v5_gn_1_44140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 49640107-49642106 Lactuca sativa
Lsat_1_v5_gn_1_44140 5.0kb upstream 5.0kb upstream 8541   true Lsat_1_v8_lg_1: 49631566-49640106 Lactuca sativa
Lsat_1_v5_gn_1_44140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 49631566-49636565 Lactuca sativa
Lsat_1_v5_gn_1_44140 5.0kb downstream 5.0kb downstream 8541   true Lsat_1_v8_lg_1: 49636566-49645106 Lactuca sativa
Lsat_1_v5_gn_1_44140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 49640107-49645106 Lactuca sativa
Lsat_1_v5_gn_1_44140 10.0kb upstream 10.0kb upstream 13541   true Lsat_1_v8_lg_1: 49626566-49640106 Lactuca sativa
Lsat_1_v5_gn_1_44140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 49626566-49636565 Lactuca sativa
Lsat_1_v5_gn_1_44140 10.0kb downstream 10.0kb downstream 13541   true Lsat_1_v8_lg_1: 49636566-49650106 Lactuca sativa
Lsat_1_v5_gn_1_44140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 49640107-49650106 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041121 5273 Angiosperm View MSA
121476921 5263 Asterids View MSA
123750756 5271 Pentapetalae View MSA
122792283 5272 Eudicot View MSA
121348544 5274 Embryophyte View MSA
123424377 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain