Gene : Lsat_1_v5_gn_1_45000 L. sativa V8
Genomic Order:  1444 Name:  ? Lsat_1_v5_gn_1_45000
Secondary Identifier:  ? PAC:38942577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_45000 0.5kb upstream 0.5kb upstream 3910   true Lsat_1_v8_lg_1: 48368243-48372152 Lactuca sativa
Lsat_1_v5_gn_1_45000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 48371653-48372152 Lactuca sativa
Lsat_1_v5_gn_1_45000 0.5kb downstream 0.5kb downstream 3910   true Lsat_1_v8_lg_1: 48367743-48371652 Lactuca sativa
Lsat_1_v5_gn_1_45000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 48367743-48368242 Lactuca sativa
Lsat_1_v5_gn_1_45000 1.0kb upstream 1.0kb upstream 4410   true Lsat_1_v8_lg_1: 48368243-48372652 Lactuca sativa
Lsat_1_v5_gn_1_45000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 48371653-48372652 Lactuca sativa
Lsat_1_v5_gn_1_45000 1.0kb downstream 1.0kb downstream 4410   true Lsat_1_v8_lg_1: 48367243-48371652 Lactuca sativa
Lsat_1_v5_gn_1_45000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 48367243-48368242 Lactuca sativa
Lsat_1_v5_gn_1_45000 2.0kb upstream 2.0kb upstream 5410   true Lsat_1_v8_lg_1: 48368243-48373652 Lactuca sativa
Lsat_1_v5_gn_1_45000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 48371653-48373652 Lactuca sativa
Lsat_1_v5_gn_1_45000 2.0kb downstream 2.0kb downstream 5410   true Lsat_1_v8_lg_1: 48366243-48371652 Lactuca sativa
Lsat_1_v5_gn_1_45000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 48366243-48368242 Lactuca sativa
Lsat_1_v5_gn_1_45000 5.0kb upstream 5.0kb upstream 8410   true Lsat_1_v8_lg_1: 48368243-48376652 Lactuca sativa
Lsat_1_v5_gn_1_45000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 48371653-48376652 Lactuca sativa
Lsat_1_v5_gn_1_45000 5.0kb downstream 5.0kb downstream 8410   true Lsat_1_v8_lg_1: 48363243-48371652 Lactuca sativa
Lsat_1_v5_gn_1_45000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 48363243-48368242 Lactuca sativa
Lsat_1_v5_gn_1_45000 10.0kb upstream 10.0kb upstream 13410   true Lsat_1_v8_lg_1: 48368243-48381652 Lactuca sativa
Lsat_1_v5_gn_1_45000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 48371653-48381652 Lactuca sativa
Lsat_1_v5_gn_1_45000 10.0kb downstream 10.0kb downstream 13410   true Lsat_1_v8_lg_1: 48358243-48371652 Lactuca sativa
Lsat_1_v5_gn_1_45000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 48358243-48368242 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481195 5263 Asterids View MSA
123740023 5271 Pentapetalae View MSA
122796084 5272 Eudicot View MSA
122042830 5273 Angiosperm View MSA
121310031 5274 Embryophyte View MSA
123347634 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain