Gene : Lsat_1_v5_gn_1_47181 L. sativa V8
Defline:  (1 of 1) K12590 - exosome complex component RRP46 (RRP46, EXOSC5) Genomic Order:  1598
Name:  ? Lsat_1_v5_gn_1_47181 Secondary Identifier:  ? PAC:38947144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_47181 0.5kb upstream 0.5kb upstream 2270   true Lsat_1_v8_lg_1: 54395964-54398233 Lactuca sativa
Lsat_1_v5_gn_1_47181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 54397734-54398233 Lactuca sativa
Lsat_1_v5_gn_1_47181 0.5kb downstream 0.5kb downstream 2270   true Lsat_1_v8_lg_1: 54395464-54397733 Lactuca sativa
Lsat_1_v5_gn_1_47181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 54395464-54395963 Lactuca sativa
Lsat_1_v5_gn_1_47181 1.0kb upstream 1.0kb upstream 2770   true Lsat_1_v8_lg_1: 54395964-54398733 Lactuca sativa
Lsat_1_v5_gn_1_47181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 54397734-54398733 Lactuca sativa
Lsat_1_v5_gn_1_47181 1.0kb downstream 1.0kb downstream 2770   true Lsat_1_v8_lg_1: 54394964-54397733 Lactuca sativa
Lsat_1_v5_gn_1_47181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 54394964-54395963 Lactuca sativa
Lsat_1_v5_gn_1_47181 2.0kb upstream 2.0kb upstream 3770   true Lsat_1_v8_lg_1: 54395964-54399733 Lactuca sativa
Lsat_1_v5_gn_1_47181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 54397734-54399733 Lactuca sativa
Lsat_1_v5_gn_1_47181 2.0kb downstream 2.0kb downstream 3770   true Lsat_1_v8_lg_1: 54393964-54397733 Lactuca sativa
Lsat_1_v5_gn_1_47181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 54393964-54395963 Lactuca sativa
Lsat_1_v5_gn_1_47181 5.0kb upstream 5.0kb upstream 6770   true Lsat_1_v8_lg_1: 54395964-54402733 Lactuca sativa
Lsat_1_v5_gn_1_47181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 54397734-54402733 Lactuca sativa
Lsat_1_v5_gn_1_47181 5.0kb downstream 5.0kb downstream 6770   true Lsat_1_v8_lg_1: 54390964-54397733 Lactuca sativa
Lsat_1_v5_gn_1_47181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 54390964-54395963 Lactuca sativa
Lsat_1_v5_gn_1_47181 10.0kb upstream 10.0kb upstream 11770   true Lsat_1_v8_lg_1: 54395964-54407733 Lactuca sativa
Lsat_1_v5_gn_1_47181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 54397734-54407733 Lactuca sativa
Lsat_1_v5_gn_1_47181 10.0kb downstream 10.0kb downstream 11770   true Lsat_1_v8_lg_1: 54385964-54397733 Lactuca sativa
Lsat_1_v5_gn_1_47181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 54385964-54395963 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473925 5263 Asterids View MSA
123740282 5271 Pentapetalae View MSA
122793891 5272 Eudicot View MSA
122042132 5273 Angiosperm View MSA
121346708 5274 Embryophyte View MSA
123426253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain