Gene : Lsat_1_v5_gn_1_4741 L. sativa V8
Defline:  (1 of 1) PTHR12161//PTHR12161:SF21 - UNCHARACTERIZED DUF292 // REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  145
Name:  ? Lsat_1_v5_gn_1_4741 Secondary Identifier:  ? PAC:38943152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_4741 0.5kb upstream 0.5kb upstream 3490   true Lsat_1_v8_lg_1: 5806544-5810033 Lactuca sativa
Lsat_1_v5_gn_1_4741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 5806544-5807043 Lactuca sativa
Lsat_1_v5_gn_1_4741 0.5kb downstream 0.5kb downstream 3490   true Lsat_1_v8_lg_1: 5807044-5810533 Lactuca sativa
Lsat_1_v5_gn_1_4741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 5810034-5810533 Lactuca sativa
Lsat_1_v5_gn_1_4741 1.0kb upstream 1.0kb upstream 3990   true Lsat_1_v8_lg_1: 5806044-5810033 Lactuca sativa
Lsat_1_v5_gn_1_4741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 5806044-5807043 Lactuca sativa
Lsat_1_v5_gn_1_4741 1.0kb downstream 1.0kb downstream 3990   true Lsat_1_v8_lg_1: 5807044-5811033 Lactuca sativa
Lsat_1_v5_gn_1_4741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 5810034-5811033 Lactuca sativa
Lsat_1_v5_gn_1_4741 2.0kb upstream 2.0kb upstream 4990   true Lsat_1_v8_lg_1: 5805044-5810033 Lactuca sativa
Lsat_1_v5_gn_1_4741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 5805044-5807043 Lactuca sativa
Lsat_1_v5_gn_1_4741 2.0kb downstream 2.0kb downstream 4990   true Lsat_1_v8_lg_1: 5807044-5812033 Lactuca sativa
Lsat_1_v5_gn_1_4741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 5810034-5812033 Lactuca sativa
Lsat_1_v5_gn_1_4741 5.0kb upstream 5.0kb upstream 7990   true Lsat_1_v8_lg_1: 5802044-5810033 Lactuca sativa
Lsat_1_v5_gn_1_4741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 5802044-5807043 Lactuca sativa
Lsat_1_v5_gn_1_4741 5.0kb downstream 5.0kb downstream 7990   true Lsat_1_v8_lg_1: 5807044-5815033 Lactuca sativa
Lsat_1_v5_gn_1_4741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 5810034-5815033 Lactuca sativa
Lsat_1_v5_gn_1_4741 10.0kb upstream 10.0kb upstream 12990   true Lsat_1_v8_lg_1: 5797044-5810033 Lactuca sativa
Lsat_1_v5_gn_1_4741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 5797044-5807043 Lactuca sativa
Lsat_1_v5_gn_1_4741 10.0kb downstream 10.0kb downstream 12990   true Lsat_1_v8_lg_1: 5807044-5820033 Lactuca sativa
Lsat_1_v5_gn_1_4741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 5810034-5820033 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467156 5263 Asterids View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain