Gene : Lsat_1_v5_gn_1_46661 L. sativa V8
Defline:  (1 of 2) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  1588
Name:  ? Lsat_1_v5_gn_1_46661 Secondary Identifier:  ? PAC:38942445
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_46661 0.5kb upstream 0.5kb upstream 9504   true Lsat_1_v8_lg_1: 53535760-53545263 Lactuca sativa
Lsat_1_v5_gn_1_46661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 53544764-53545263 Lactuca sativa
Lsat_1_v5_gn_1_46661 0.5kb downstream 0.5kb downstream 9504   true Lsat_1_v8_lg_1: 53535260-53544763 Lactuca sativa
Lsat_1_v5_gn_1_46661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 53535260-53535759 Lactuca sativa
Lsat_1_v5_gn_1_46661 1.0kb upstream 1.0kb upstream 10004   true Lsat_1_v8_lg_1: 53535760-53545763 Lactuca sativa
Lsat_1_v5_gn_1_46661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 53544764-53545763 Lactuca sativa
Lsat_1_v5_gn_1_46661 1.0kb downstream 1.0kb downstream 10004   true Lsat_1_v8_lg_1: 53534760-53544763 Lactuca sativa
Lsat_1_v5_gn_1_46661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 53534760-53535759 Lactuca sativa
Lsat_1_v5_gn_1_46661 2.0kb upstream 2.0kb upstream 11004   true Lsat_1_v8_lg_1: 53535760-53546763 Lactuca sativa
Lsat_1_v5_gn_1_46661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 53544764-53546763 Lactuca sativa
Lsat_1_v5_gn_1_46661 2.0kb downstream 2.0kb downstream 11004   true Lsat_1_v8_lg_1: 53533760-53544763 Lactuca sativa
Lsat_1_v5_gn_1_46661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 53533760-53535759 Lactuca sativa
Lsat_1_v5_gn_1_46661 5.0kb upstream 5.0kb upstream 14004   true Lsat_1_v8_lg_1: 53535760-53549763 Lactuca sativa
Lsat_1_v5_gn_1_46661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 53544764-53549763 Lactuca sativa
Lsat_1_v5_gn_1_46661 5.0kb downstream 5.0kb downstream 14004   true Lsat_1_v8_lg_1: 53530760-53544763 Lactuca sativa
Lsat_1_v5_gn_1_46661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 53530760-53535759 Lactuca sativa
Lsat_1_v5_gn_1_46661 10.0kb upstream 10.0kb upstream 19004   true Lsat_1_v8_lg_1: 53535760-53554763 Lactuca sativa
Lsat_1_v5_gn_1_46661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 53544764-53554763 Lactuca sativa
Lsat_1_v5_gn_1_46661 10.0kb downstream 10.0kb downstream 19004   true Lsat_1_v8_lg_1: 53525760-53544763 Lactuca sativa
Lsat_1_v5_gn_1_46661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 53525760-53535759 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476432 5263 Asterids View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain