Gene : Lsat_1_v5_gn_1_47121 L. sativa V8
Defline:  (1 of 3) PTHR11062//PTHR11062:SF108 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  1595
Name:  ? Lsat_1_v5_gn_1_47121 Secondary Identifier:  ? PAC:38944932
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5980 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_47121 0.5kb upstream 0.5kb upstream 4464   true Lsat_1_v8_lg_1: 54313802-54318265 Lactuca sativa
Lsat_1_v5_gn_1_47121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 54317766-54318265 Lactuca sativa
Lsat_1_v5_gn_1_47121 0.5kb downstream 0.5kb downstream 4464   true Lsat_1_v8_lg_1: 54313302-54317765 Lactuca sativa
Lsat_1_v5_gn_1_47121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 54313302-54313801 Lactuca sativa
Lsat_1_v5_gn_1_47121 1.0kb upstream 1.0kb upstream 4964   true Lsat_1_v8_lg_1: 54313802-54318765 Lactuca sativa
Lsat_1_v5_gn_1_47121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 54317766-54318765 Lactuca sativa
Lsat_1_v5_gn_1_47121 1.0kb downstream 1.0kb downstream 4964   true Lsat_1_v8_lg_1: 54312802-54317765 Lactuca sativa
Lsat_1_v5_gn_1_47121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 54312802-54313801 Lactuca sativa
Lsat_1_v5_gn_1_47121 2.0kb upstream 2.0kb upstream 5964   true Lsat_1_v8_lg_1: 54313802-54319765 Lactuca sativa
Lsat_1_v5_gn_1_47121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 54317766-54319765 Lactuca sativa
Lsat_1_v5_gn_1_47121 2.0kb downstream 2.0kb downstream 5964   true Lsat_1_v8_lg_1: 54311802-54317765 Lactuca sativa
Lsat_1_v5_gn_1_47121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 54311802-54313801 Lactuca sativa
Lsat_1_v5_gn_1_47121 5.0kb upstream 5.0kb upstream 8964   true Lsat_1_v8_lg_1: 54313802-54322765 Lactuca sativa
Lsat_1_v5_gn_1_47121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 54317766-54322765 Lactuca sativa
Lsat_1_v5_gn_1_47121 5.0kb downstream 5.0kb downstream 8964   true Lsat_1_v8_lg_1: 54308802-54317765 Lactuca sativa
Lsat_1_v5_gn_1_47121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 54308802-54313801 Lactuca sativa
Lsat_1_v5_gn_1_47121 10.0kb upstream 10.0kb upstream 13964   true Lsat_1_v8_lg_1: 54313802-54327765 Lactuca sativa
Lsat_1_v5_gn_1_47121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 54317766-54327765 Lactuca sativa
Lsat_1_v5_gn_1_47121 10.0kb downstream 10.0kb downstream 13964   true Lsat_1_v8_lg_1: 54303802-54317765 Lactuca sativa
Lsat_1_v5_gn_1_47121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 54303802-54313801 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
121480427 5263 Asterids View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain