Gene : Lsat_1_v5_gn_1_46861 L. sativa V8
Defline:  (1 of 1) PTHR11062//PTHR11062:SF87 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  1592
Name:  ? Lsat_1_v5_gn_1_46861 Secondary Identifier:  ? PAC:38947175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5980 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_1_46861 0.5kb upstream 0.5kb upstream 4531   true Lsat_1_v8_lg_1: 54050018-54054548 Lactuca sativa
Lsat_1_v5_gn_1_46861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_1: 54054049-54054548 Lactuca sativa
Lsat_1_v5_gn_1_46861 0.5kb downstream 0.5kb downstream 4531   true Lsat_1_v8_lg_1: 54049518-54054048 Lactuca sativa
Lsat_1_v5_gn_1_46861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_1: 54049518-54050017 Lactuca sativa
Lsat_1_v5_gn_1_46861 1.0kb upstream 1.0kb upstream 5031   true Lsat_1_v8_lg_1: 54050018-54055048 Lactuca sativa
Lsat_1_v5_gn_1_46861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_1: 54054049-54055048 Lactuca sativa
Lsat_1_v5_gn_1_46861 1.0kb downstream 1.0kb downstream 5031   true Lsat_1_v8_lg_1: 54049018-54054048 Lactuca sativa
Lsat_1_v5_gn_1_46861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_1: 54049018-54050017 Lactuca sativa
Lsat_1_v5_gn_1_46861 2.0kb upstream 2.0kb upstream 6031   true Lsat_1_v8_lg_1: 54050018-54056048 Lactuca sativa
Lsat_1_v5_gn_1_46861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_1: 54054049-54056048 Lactuca sativa
Lsat_1_v5_gn_1_46861 2.0kb downstream 2.0kb downstream 6031   true Lsat_1_v8_lg_1: 54048018-54054048 Lactuca sativa
Lsat_1_v5_gn_1_46861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_1: 54048018-54050017 Lactuca sativa
Lsat_1_v5_gn_1_46861 5.0kb upstream 5.0kb upstream 9031   true Lsat_1_v8_lg_1: 54050018-54059048 Lactuca sativa
Lsat_1_v5_gn_1_46861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_1: 54054049-54059048 Lactuca sativa
Lsat_1_v5_gn_1_46861 5.0kb downstream 5.0kb downstream 9031   true Lsat_1_v8_lg_1: 54045018-54054048 Lactuca sativa
Lsat_1_v5_gn_1_46861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_1: 54045018-54050017 Lactuca sativa
Lsat_1_v5_gn_1_46861 10.0kb upstream 10.0kb upstream 14031   true Lsat_1_v8_lg_1: 54050018-54064048 Lactuca sativa
Lsat_1_v5_gn_1_46861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_1: 54054049-54064048 Lactuca sativa
Lsat_1_v5_gn_1_46861 10.0kb downstream 10.0kb downstream 14031   true Lsat_1_v8_lg_1: 54040018-54054048 Lactuca sativa
Lsat_1_v5_gn_1_46861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_1: 54040018-54050017 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
121464484 5263 Asterids View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain